Neck of native gta particle computed with c6 symmetry
PDB DOI: 10.2210/pdb6te9/pdb
Classification: VIRUS Organism(s): Rhodobacter Capsulatus
Deposited: 2019-11-11 Deposition Author(s): Bardy, P. , Beatty, J.T. , Fuzik, T. , Hrebik, D. , Pantucek, R. , Plevka, P.
Neck of native gta particle computed with c6 symmetry
Bardy, P. , Beatty, J.T. , Fuzik, T. , Hrebik, D. , Pantucek, R. , Plevka, P.
Primary Citation of Related Structures: 6TE9
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Adaptor protein Rcc01688 | C | 197 | Rhodobacter Capsulatus | MMLNEVTAVPGTALPVAEFRDHLRLGTGFADLGAEDAALLSYLRAAIAAIEGRTAKALISRGFRLALTAWRWGDMQTLPIAPVATVTALRLVDAAGVETPVAAGWRLVPDMARPRIEALGAMLPMIPTGGRVEIDFTAGFGASWSALPVDLAQAVFLLAAQYYELRHDGAAEGGAMPFGVMALIERWRTVRVLGGRP |
Adaptor protein Rcc01688 | D | 197 | Rhodobacter Capsulatus | MMLNEVTAVPGTALPVAEFRDHLRLGTGFADLGAEDAALLSYLRAAIAAIEGRTAKALISRGFRLALTAWRWGDMQTLPIAPVATVTALRLVDAAGVETPVAAGWRLVPDMARPRIEALGAMLPMIPTGGRVEIDFTAGFGASWSALPVDLAQAVFLLAAQYYELRHDGAAEGGAMPFGVMALIERWRTVRVLGGRP |
Phage portal protein, HK97 family | A | 396 | Rhodobacter Capsulatus | MGLNFFRKAAPEVRTEPVAERKASVTGRIVAMASGAGRPVWGPRDTVSLMRTGFAGNPVGFRSVKLIAEATAAVPLICQDAERRYEIHPVLDLLRRPNAGQGRAELFEALIGQILLSGNGYLEAVCPEPGVPRELHVLRSDRMAVVPGADGWPVGYDYTVGGRKHRFDMTGHPDPICHIKSFHPTDDHYGLSPMQAAAVALDVHNAASAWSKALLDNAARPSGAIIYKGADGQGVLAPEQYERLIFEMETHHQGARNAGRPMLLEGGLDWKPMGFSPSDMEFHETKAAAAREIALAFGVPPMLIGIPGDATYANYAEANRAFYRLTVLPLLTRVSAALAWWLSGYLGAQIELKPDLDQVPALAVERDQLWARIGAAGFLSNSEKRVLLGLPPTAEG |
Phage portal protein, HK97 family | B | 396 | Rhodobacter Capsulatus | MGLNFFRKAAPEVRTEPVAERKASVTGRIVAMASGAGRPVWGPRDTVSLMRTGFAGNPVGFRSVKLIAEATAAVPLICQDAERRYEIHPVLDLLRRPNAGQGRAELFEALIGQILLSGNGYLEAVCPEPGVPRELHVLRSDRMAVVPGADGWPVGYDYTVGGRKHRFDMTGHPDPICHIKSFHPTDDHYGLSPMQAAAVALDVHNAASAWSKALLDNAARPSGAIIYKGADGQGVLAPEQYERLIFEMETHHQGARNAGRPMLLEGGLDWKPMGFSPSDMEFHETKAAAAREIALAFGVPPMLIGIPGDATYANYAEANRAFYRLTVLPLLTRVSAALAWWLSGYLGAQIELKPDLDQVPALAVERDQLWARIGAAGFLSNSEKRVLLGLPPTAEG |
Tail terminator protein Rcc01690 | F | 135 | Rhodobacter Capsulatus | MSYAVAGALQAAVYQQLRADAVLAALVGTAVYDAVPPGPLAGTYVSLGPEDVADASDKTGAGAVHDFVISVITDAAGFATAKAAAAAVSDALVGADLVLSRGRLVGLWFLRAKARRVEKADMRRIDLVFRARVEG |
Stopper protein Rcc01689 | E | 112 | Rhodobacter Capsulatus | MSRPRLNRLLVLEEAVRVADGAGGHRLDWQAKGEVWAEVTAGSGSERAGEFVTLASVPFTIVVRAAPVGAARRPRPEQRFREGARIFRILAVAERDREGHYLSCFAREEVVA |
Phage major tail protein, TP901-1 family | G | 137 | Rhodobacter Capsulatus | MAAQNGKDLLIKLDLTGSGQFETIAGLRATRISFNAETVDVTSLESQGGWRELLGGAGVRSASISGAGVFKDADTDERARQIFFDGEVPEFQVIIPDFGIVQGPFMITSIDYAGSHNGEASYELAMASAGALSFTAI |
Method: ELECTRON MICROSCOPY
Deposited Date: 2019-11-11 Deposition Author(s): Bardy, P. , Beatty, J.T. , Fuzik, T. , Hrebik, D. , Pantucek, R. , Plevka, P.