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FASTA Sequence PDB Format mmCIF Format
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6T7C

Structure of two copies of human sox11 transcription factor in complex with a nucleosome

PDB DOI: 10.2210/pdb6t7c/pdb

Classification: NUCLEAR PROTEIN
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2019-10-21
Deposition Author(s): Cramer, P. , Dienemann, C. , Dodonova, S.O. , Taipale, J. , Zhu, F.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.0 Å

Literature

Structure of two copies of human sox11 transcription factor in complex with a nucleosome

Cramer, P. , Dienemann, C. , Dodonova, S.O. , Taipale, J. , Zhu, F.

Primary Citation of Related Structures: 6T7C


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3.2 A 136 Homo Sapiens , Synthetic Construct MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLAAIHAKRVTIMPKDIQLARRIRGERA
Histone H3.2 E 136 Homo Sapiens , Synthetic Construct MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLAAIHAKRVTIMPKDIQLARRIRGERA
Histone H4 B 103 Homo Sapiens , Synthetic Construct MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H4 F 103 Homo Sapiens , Synthetic Construct MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A type 1-B/E C 151 Homo Sapiens , Synthetic Construct MGSSHHHHHHENLYFQSNAPWMSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Histone H2A type 1-B/E G 151 Homo Sapiens , Synthetic Construct MGSSHHHHHHENLYFQSNAPWMSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Histone H2B type 1-K D 126 Homo Sapiens , Synthetic Construct MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Histone H2B type 1-K H 126 Homo Sapiens , Synthetic Construct MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Transcription factor SOX-11 K 109 Homo Sapiens , Synthetic Construct SNAALDESDPDWCKTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPRKKPKMDPSAKPSASQSP
Transcription factor SOX-11 L 109 Homo Sapiens , Synthetic Construct SNAALDESDPDWCKTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPRKKPKMDPSAKPSASQSP

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (147-MER) i 147 NA ATCTACACGACGCTCTTCCGATCTAATTTATGTTTGTTAGCGTTATACTATTCTAATTCTTTGTTTCGGTGGTATTGTTTATTTTGTTCCTTTGTGCGTTCAGCTTAATGCCTAACGACACTCGGAGATCGGAAGAGCACACGTGAT
DNA (147-MER) j 147 NA ATCACGTGTGCTCTTCCGATCTCCGAGTGTCGTTAGGCATTAAGCTGAACGCACAAAGGAACAAAATAAACAATACCACCGAAACAAAGAATTAGAATAGTATAACGCTAACAAACATAAATTAGATCGGAAGAGCGTCGTGTAGAT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-10-21
Deposition Author(s): Cramer, P. , Dienemann, C. , Dodonova, S.O. , Taipale, J. , Zhu, F.