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6T5T

Crystal structure of archaeoglobus fulgidus argonaute protein with cognate dna oligoduplex 5'-pattgtggccacaat

PDB DOI: 10.2210/pdb6t5t/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Archaeoglobus Fulgidus (Strain Atcc 49558 / Vc-16 / Dsm 4304 / Jcm 9628 / Nbrc 100126) , Synthetic Construct

Deposited: 2019-10-17
Deposition Author(s): Grazulis, S. , Zaremba, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.7003 Å

6t5t
Literature

Crystal structure of archaeoglobus fulgidus argonaute protein with cognate dna oligoduplex 5'-pattgtggccacaat

Grazulis, S. , Zaremba, M.

Primary Citation of Related Structures: 6T5T


Proteins
Molecule Chains Sequence Length Organism Sequence
Piwi protein AF_1318 A 441 Archaeoglobus Fulgidus (Strain Atcc 49558 / Vc-16 / Dsm 4304 / Jcm 9628 / Nbrc 100126) , Synthetic Construct MGSSHHHHHHSQDPMMEYKIVENGLTYRIGNGASVPISNTGELIKGLRNYGPYEVPSLKYNQIALIHNNQFSSLINQLKSQISSKIDEVWHIHNINISEFIYDSPHFDSIKSQVDNAIDTGVDGIMLVLPEYNTPLYYKLKSYLINSIPSQFMRYDILSNRNLTFYVDNLLVQFVSKLGGKPWILNVDPEKGSDIIIGTGATRIDNVNLFCFAMVFKKDGTMLWNEISPIVTSSEYLTYLKSTIKKVVYGFKKSNPDWDVEKLTLHVSGKRPKMKDGETKILKETVEELKKQEMVSRDVKYAILHLNETHPFWVMGDPNNRFHPYEGTKVKLSSKRYLLTLLQPYLKRNGLEMVTPIKPLSVEIVSDNWTSEEYYHNVHEILDEIYYLSKMNWRGFRSRNLPVTVNYPKLVAGIIANVNRYGGYPINPEGNRSLQTNPWFL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*AP*TP*TP*GP*TP*GP*GP*CP*CP*AP*CP*AP*AP*TP)-3' r 14 NA ATTGTGGCCACAAT
5'-D(*AP*TP*TP*GP*TP*GP*GP*CP*CP*AP*CP*AP*AP*TP)-3' s 14 NA ATTGTGGCCACAAT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-10-17
Deposition Author(s): Grazulis, S. , Zaremba, M.