6T22
N-terminal domain of ecokmcra restriction endonuclease (neco) in complex with t5hmcga target sequence
PDB DOI: 10.2210/pdb6t22/pdb
Classification: HYDROLASE Organism(s): Escherichia Coli K-12 , Synthetic Construct
Deposited: 2019-10-07 Deposition Author(s): Bochtler, M. , Czapinska, H. , Sasnauskas, G. , Slyvka, A. , Zagorskaite, E.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.21 Å
N-terminal domain of ecokmcra restriction endonuclease (neco) in complex with t5hmcga target sequence
Bochtler, M. , Czapinska, H. , Sasnauskas, G. , Slyvka, A. , Zagorskaite, E.
Primary Citation of Related Structures: 6T22
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| EcoKMcrA modification dependent restriction endonuclease | A | 152 | Escherichia Coli K-12 , Synthetic Construct | GHHHHHHEFMHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVVVYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCGYQAYFSRTGRKEIPSGNRTKRILINVPGIYSDSFWASIIRG |
| EcoKMcrA modification dependent restriction endonuclease | B | 152 | Escherichia Coli K-12 , Synthetic Construct | GHHHHHHEFMHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVVVYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCGYQAYFSRTGRKEIPSGNRTKRILINVPGIYSDSFWASIIRG |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*TP*CP*AP*TP*(5HC)P*GP*AP*TP*TP*C)-3') | c | 10 | NA | TCATXGATTC |
| DNA (5'-D(*TP*CP*AP*TP*(5HC)P*GP*AP*TP*TP*C)-3') | e | 10 | NA | TCATXGATTC |
| DNA (5'-D(*GP*AP*AP*TP*(5HC)P*GP*AP*TP*GP*A)-3') | d | 10 | NA | GAATXGATGA |
| DNA (5'-D(*GP*AP*AP*TP*(5HC)P*GP*AP*TP*GP*A)-3') | f | 10 | NA | GAATXGATGA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2019-10-07 Deposition Author(s): Bochtler, M. , Czapinska, H. , Sasnauskas, G. , Slyvka, A. , Zagorskaite, E.