N-terminal domain of ecokmcra restriction endonuclease (neco) in complex with t5mcga target sequence
PDB DOI: 10.2210/pdb6t21/pdb
Classification: HYDROLASE Organism(s): Escherichia Coli (Strain K12) , Synthetic Construct
Deposited: 2019-10-07 Deposition Author(s): Bochtler, M. , Czapinska, H. , Sasnauskas, G. , Slyvka, A. , Zagorskaite, E.
Method: X-RAY DIFFRACTION Resolution: 2.07 Å
N-terminal domain of ecokmcra restriction endonuclease (neco) in complex with t5mcga target sequence
Bochtler, M. , Czapinska, H. , Sasnauskas, G. , Slyvka, A. , Zagorskaite, E.
Primary Citation of Related Structures: 6T21
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
5-methylcytosine-specific restriction enzyme A | A | 152 | Escherichia Coli (Strain K12) , Synthetic Construct | GHHHHHHEFMHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVVVYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCGYQAYFSRTGRKEIPSGNRTKRILINVPGIYSDSFWASIIRG |
5-methylcytosine-specific restriction enzyme A | B | 152 | Escherichia Coli (Strain K12) , Synthetic Construct | GHHHHHHEFMHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVVVYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCGYQAYFSRTGRKEIPSGNRTKRILINVPGIYSDSFWASIIRG |
Nucleic Acids / Hybrid | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
DNA (5'-D(*TP*CP*AP*TP*(5CM)P*GP*AP*TP*TP*C)-3') | c | 10 | NA | TCATCGATTC |
DNA (5'-D(*TP*CP*AP*TP*(5CM)P*GP*AP*TP*TP*C)-3') | e | 10 | NA | TCATCGATTC |
DNA (5'-D(*GP*AP*AP*TP*(5CM)P*GP*AP*TP*GP*A)-3') | d | 10 | NA | GAATCGATGA |
DNA (5'-D(*GP*AP*AP*TP*(5CM)P*GP*AP*TP*GP*A)-3') | f | 10 | NA | GAATCGATGA |
Method: X-RAY DIFFRACTION
Deposited Date: 2019-10-07 Deposition Author(s): Bochtler, M. , Czapinska, H. , Sasnauskas, G. , Slyvka, A. , Zagorskaite, E.