PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6SYF

Human ubc9 with covalent isopeptide ligand

PDB DOI: 10.2210/pdb6syf/pdb

Classification: LIGASE
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2019-09-27
Deposition Author(s): Akimoto, G. , Bode, J.W. , Hofmann, R. , Wucherpfennig, T.G. , Zeymer, C.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.9 Å

6syf
Literature

Human ubc9 with covalent isopeptide ligand

Akimoto, G. , Bode, J.W. , Hofmann, R. , Wucherpfennig, T.G. , Zeymer, C.

Primary Citation of Related Structures: 6SYF


Proteins
Molecule Chains Sequence Length Organism Sequence
SUMO-conjugating enzyme UBC9 A 158 Homo Sapiens , Synthetic Construct GSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGAAGTPWAGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYAQNRVEYEKRVRAQAKKFAPS
SUMO-conjugating enzyme UBC9 B 158 Homo Sapiens , Synthetic Construct GSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGAAGTPWAGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYAQNRVEYEKRVRAQAKKFAPS
SUMO-conjugating enzyme UBC9 C 158 Homo Sapiens , Synthetic Construct GSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGAAGTPWAGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYAQNRVEYEKRVRAQAKKFAPS
SUMO-conjugating enzyme UBC9 D 158 Homo Sapiens , Synthetic Construct GSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGAAGTPWAGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYAQNRVEYEKRVRAQAKKFAPS
ACE-LEU-ARG-LEU-ARG-GLY-CYS E 7 Homo Sapiens , Synthetic Construct XLRLRGC
ACE-LEU-ARG-LEU-ARG-GLY-CYS G 7 Homo Sapiens , Synthetic Construct XLRLRGC
ACE-LEU-ARG-LEU-ARG-GLY-CYS I 7 Homo Sapiens , Synthetic Construct XLRLRGC
ACE-LEU-ARG-LEU-ARG-GLY-CYS K 7 Homo Sapiens , Synthetic Construct XLRLRGC
ACE-ILE-LYS-GLN-GLU F 5 Homo Sapiens , Synthetic Construct XIKQE
ACE-ILE-LYS-GLN-GLU H 5 Homo Sapiens , Synthetic Construct XIKQE
ACE-ILE-LYS-GLN-GLU J 5 Homo Sapiens , Synthetic Construct XIKQE
ACE-ILE-LYS-GLN-GLU L 5 Homo Sapiens , Synthetic Construct XIKQE
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-09-27
Deposition Author(s): Akimoto, G. , Bode, J.W. , Hofmann, R. , Wucherpfennig, T.G. , Zeymer, C.