6SY0
Structure of the plasmodium falciparum sip2 dna-binding ap2 tandem repeat in complex with two spe2 half-sites
PDB DOI: 10.2210/pdb6sy0/pdb
Classification: DNA BINDING PROTEIN Organism(s): Plasmodium Falciparum (Isolate 3D7) , Synthetic Construct
Deposited: 2019-09-26 Deposition Author(s): Kantsadi, A. , Reiter, D. , Vakonakis, I.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.102 Å
Structure of the plasmodium falciparum sip2 dna-binding ap2 tandem repeat in complex with two spe2 half-sites
Kantsadi, A. , Reiter, D. , Vakonakis, I.
Primary Citation of Related Structures: 6SY0
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Transcription factor with AP2 domain(S) | A | 139 | Plasmodium Falciparum (Isolate 3D7) , Synthetic Construct | MREHIGSQEPVILIDKIERCLVVEWYENNIRREQRISYKKYGNDKAKLRAKELIEKLKSGITFEQLYPDKGPPIVRVFENVGVYNVSLIRDRIEREWRVEWLENGVPMKARWSCKKVGNDEAQKRADTFAQSMIKGIFN |
| Transcription factor with AP2 domain(S) | B | 139 | Plasmodium Falciparum (Isolate 3D7) , Synthetic Construct | MREHIGSQEPVILIDKIERCLVVEWYENNIRREQRISYKKYGNDKAKLRAKELIEKLKSGITFEQLYPDKGPPIVRVFENVGVYNVSLIRDRIEREWRVEWLENGVPMKARWSCKKVGNDEAQKRADTFAQSMIKGIFN |
| Transcription factor with AP2 domain(S) | C | 139 | Plasmodium Falciparum (Isolate 3D7) , Synthetic Construct | MREHIGSQEPVILIDKIERCLVVEWYENNIRREQRISYKKYGNDKAKLRAKELIEKLKSGITFEQLYPDKGPPIVRVFENVGVYNVSLIRDRIEREWRVEWLENGVPMKARWSCKKVGNDEAQKRADTFAQSMIKGIFN |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*GP*GP*TP*GP*CP*AP*CP*CP*TP*AP*GP*GP*TP*GP*CP*AP*CP*C)-3') | e | 18 | NA | GGTGCACCTAGGTGCACC |
| DNA (5'-D(*GP*GP*TP*GP*CP*AP*CP*CP*TP*AP*GP*GP*TP*GP*CP*AP*CP*C)-3') | f | 18 | NA | GGTGCACCTAGGTGCACC |
| DNA (5'-D(*GP*GP*TP*GP*CP*AP*CP*CP*TP*AP*GP*GP*TP*GP*CP*AP*CP*C)-3') | g | 18 | NA | GGTGCACCTAGGTGCACC |
| DNA (5'-D(*GP*GP*TP*GP*CP*AP*CP*CP*TP*AP*GP*GP*TP*GP*CP*AP*CP*C)-3') | h | 18 | NA | GGTGCACCTAGGTGCACC |
| DNA (5'-D(*GP*GP*TP*GP*CP*AP*CP*CP*TP*AP*GP*GP*TP*GP*CP*AP*CP*C)-3') | k | 18 | NA | GGTGCACCTAGGTGCACC |
| DNA (5'-D(*GP*GP*TP*GP*CP*AP*CP*CP*TP*AP*GP*GP*TP*GP*CP*AP*CP*C)-3') | l | 18 | NA | GGTGCACCTAGGTGCACC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2019-09-26 Deposition Author(s): Kantsadi, A. , Reiter, D. , Vakonakis, I.