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FASTA Sequence PDB Format mmCIF Format
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6SM3

Structure of the ragab peptide importer in the 'closed-closed' state

PDB DOI: 10.2210/pdb6sm3/pdb

Classification: MEMBRANE PROTEIN
Organism(s): Porphyromonas Gingivalis (Strain Atcc Baa-308 / W83) , Porphyromonas Gingivalis W83

Deposited: 2019-08-21
Deposition Author(s): Ranson, N.A. , Van Den Berg, B. , White, J.B.R.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.3 Å

6sm3
Literature

Structure of the ragab peptide importer in the 'closed-closed' state

Ranson, N.A. , Van Den Berg, B. , White, J.B.R.

Primary Citation of Related Structures: 6SM3


Proteins
Molecule Chains Sequence Length Organism Sequence
Lipoprotein RagB A 482 Porphyromonas Gingivalis (Strain Atcc Baa-308 / W83) , Porphyromonas Gingivalis W83 CELDRDPEGKDFQQPYTSFVQTKQNRDGLYALLRNTENPRMHFYQELQSDMYCTTITDGNSLAPFVNWDLGILNDHGRADEDEVSGIAGYYFVYNRLNQQANAFVNNTEAALQNQVYKNSTEIANAKSFLAEGKVLQALAIWRLMDRFSFHESVTEVNSGAKDLGVILLKEYNPGYIGPRATKAQCYDYILSRLSEAIEVLPENRESVLYVSRDYAYALRARIYLALGEYGKAAADAKMVVDKYPLIGAADASEFENIYRSDANNPEIIFRGFASATLGSFTATTLNGAAPAGKDIKYNPSAVPFQWVVDLYENEDFRKSVYIAKVVKKDKGYLVNKFLEDKAYRDVQDKPNLKVGARYFSVAEVYLILVESALQTGDTPTAEKYLKALSKARGAEVSVVNMEALQAERTRELIGEGSRLRDMVRWSIPNNHDAFETQPGLEGFANTTPLKAQAPVGFYAYTWEFPQRDRQTNPQLIKNWPI
RagA protein B 903 Porphyromonas Gingivalis (Strain Atcc Baa-308 / W83) , Porphyromonas Gingivalis W83 LSTVSGSVAKVSSEKLAEKPVANIMDALQGQVAGMQVMTTSGDPTAVASVEIHGTGSLGASSAPLYIVDGMQTSLDVVATMNPNDFESMSVLKDASATSIYGARAANGVVFIQTKKGKMSERGRITFNASYGISQILNTKPLDNMMTGDELLDFQVKAGFWGNNQTVQKVKDMILAGAEDLYGNYDSLKDEYGKTLFPVDFNHDADWLKALFKTAPTSQGDISFSGGSQGTSYYASIGYFDQEGMAREPANFKRYSGRLNFESRINEWLKVGANLSGAIANRRSADYFGKYYMGSGTFGVLTMPRYYNPFDVNGDLADVYYMYGATRPSMTEPYFAKMRPFSSESHQANVNGFAQITPIKGLTLKAQAGVDITNTRTSSKRMPNNPYDSTPLGERRERAYRDVSKSFTNTAEYKFSIDEKHDLTALMGHEYIEYEGDVIGASSKGFESDKLMLLSQGKTGNSLSLPEHRVAEYAYLSFFSRFNYGFDKWMYIDFSVRNDQSSRFGSNNRSAWFYSVGGMFDIYNKFIQESNWLSDLRLKMSYGTTGNSEIGNYNHQALVTVNNYTEDAMGLSISTAGNPDLSWEKQSQFNFGLAAGAFNNRLSAEVDFYVRTTNDMLIDVPMPYISGFFSQYQNVGSMKNTGVDLSLKGTIYQNKDWNVYASANFNYNRQEITKLFFGLNKYMLPNTGTIWEIGYPNSFYMAEYAGIDKKTGKQLWYVPGQVDADGNKVTTSQYSADLETRIDKSVTPPITGGFSLGASWKGLSLDADFAYIVGKWMINNDRYFTENGGGLMQLNKDKMLLNAWTEDNKETDVPKLGQSPQFDTHLLENASFLRLKNLKLTYVLPNSLFAGQNVIGGARVYLMARNLLTVTKYKGFDPEAGGNVGKNQYPNSKQYVAGIQLSF
GLY-GLY-ALA-THR-THR-ALA-THR-THR-THR-THR-SER-THR-SER C 13 Porphyromonas Gingivalis (Strain Atcc Baa-308 / W83) , Porphyromonas Gingivalis W83 GGATTATTTTSTS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-08-21
Deposition Author(s): Ranson, N.A. , Van Den Berg, B. , White, J.B.R.