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FASTA Sequence PDB Format mmCIF Format
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6SLJ

Structure of the ragab peptide transporter

PDB DOI: 10.2210/pdb6slj/pdb

Classification: MEMBRANE PROTEIN
Organism(s): Porphyromonas Gingivalis (Strain Atcc Baa-308 / W83) , Porphyromonas Gingivalis W83

Deposited: 2019-08-20
Deposition Author(s): Madej, M. , Ranson, N.A. , White, J.B.R.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.04 Å

6slj
Literature

Structure of the ragab peptide transporter

Madej, M. , Ranson, N.A. , White, J.B.R.

Primary Citation of Related Structures: 6SLJ


Proteins
Molecule Chains Sequence Length Organism Sequence
RagA protein B 997 Porphyromonas Gingivalis (Strain Atcc Baa-308 / W83) , Porphyromonas Gingivalis W83 QNRTVKGTVISSEDNEPLIGANVVVVGNTTIGAATDLDGNFTLSVPANAKMLRVSYSGMTTKEVAIANVMKIVLDPDSKVLEQVVVLGYGTGQKLSTVSGSVAKVSSEKLAEKPVANIMDALQGQVAGMQVMTTSGDPTAVASVEIHGTGSLGASSAPLYIVDGMQTSLDVVATMNPNDFESMSVLKDASATSIYGARAANGVVFIQTKKGKMSERGRITFNASYGISQILNTKPLDNMMTGDELLDFQVKAGFWGNNQTVQKVKDMILAGAEDLYGNYDSLKDEYGKTLFPVDFNHDADWLKALFKTAPTSQGDISFSGGSQGTSYYASIGYFDQEGMAREPANFKRYSGRLNFESRINEWLKVGANLSGAIANRRSADYFGKYYMGSGTFGVLTMPRYYNPFDVNGDLADVYYMYGATRPSMTEPYFAKMRPFSSESHQANVNGFAQITPIKGLTLKAQAGVDITNTRTSSKRMPNNPYDSTPLGERRERAYRDVSKSFTNTAEYKFSIDEKHDLTALMGHEYIEYEGDVIGASSKGFESDKLMLLSQGKTGNSLSLPEHRVAEYAYLSFFSRFNYGFDKWMYIDFSVRNDQSSRFGSNNRSAWFYSVGGMFDIYNKFIQESNWLSDLRLKMSYGTTGNSEIGNYNHQALVTVNNYTEDAMGLSISTAGNPDLSWEKQSQFNFGLAAGAFNNRLSAEVDFYVRTTNDMLIDVPMPYISGFFSQYQNVGSMKNTGVDLSLKGTIYQNKDWNVYASANFNYNRQEITKLFFGLNKYMLPNTGTIWEIGYPNSFYMAEYAGIDKKTGKQLWYVPGQVDADGNKVTTSQYSADLETRIDKSVTPPITGGFSLGASWKGLSLDADFAYIVGKWMINNDRYFTENGGGLMQLNKDKMLLNAWTEDNKETDVPKLGQSPQFDTHLLENASFLRLKNLKLTYVLPNSLFAGQNVIGGARVYLMARNLLTVTKYKGFDPEAGGNVGKNQYPNSKQYVAGIQLSF
RagA protein A 997 Porphyromonas Gingivalis (Strain Atcc Baa-308 / W83) , Porphyromonas Gingivalis W83 QNRTVKGTVISSEDNEPLIGANVVVVGNTTIGAATDLDGNFTLSVPANAKMLRVSYSGMTTKEVAIANVMKIVLDPDSKVLEQVVVLGYGTGQKLSTVSGSVAKVSSEKLAEKPVANIMDALQGQVAGMQVMTTSGDPTAVASVEIHGTGSLGASSAPLYIVDGMQTSLDVVATMNPNDFESMSVLKDASATSIYGARAANGVVFIQTKKGKMSERGRITFNASYGISQILNTKPLDNMMTGDELLDFQVKAGFWGNNQTVQKVKDMILAGAEDLYGNYDSLKDEYGKTLFPVDFNHDADWLKALFKTAPTSQGDISFSGGSQGTSYYASIGYFDQEGMAREPANFKRYSGRLNFESRINEWLKVGANLSGAIANRRSADYFGKYYMGSGTFGVLTMPRYYNPFDVNGDLADVYYMYGATRPSMTEPYFAKMRPFSSESHQANVNGFAQITPIKGLTLKAQAGVDITNTRTSSKRMPNNPYDSTPLGERRERAYRDVSKSFTNTAEYKFSIDEKHDLTALMGHEYIEYEGDVIGASSKGFESDKLMLLSQGKTGNSLSLPEHRVAEYAYLSFFSRFNYGFDKWMYIDFSVRNDQSSRFGSNNRSAWFYSVGGMFDIYNKFIQESNWLSDLRLKMSYGTTGNSEIGNYNHQALVTVNNYTEDAMGLSISTAGNPDLSWEKQSQFNFGLAAGAFNNRLSAEVDFYVRTTNDMLIDVPMPYISGFFSQYQNVGSMKNTGVDLSLKGTIYQNKDWNVYASANFNYNRQEITKLFFGLNKYMLPNTGTIWEIGYPNSFYMAEYAGIDKKTGKQLWYVPGQVDADGNKVTTSQYSADLETRIDKSVTPPITGGFSLGASWKGLSLDADFAYIVGKWMINNDRYFTENGGGLMQLNKDKMLLNAWTEDNKETDVPKLGQSPQFDTHLLENASFLRLKNLKLTYVLPNSLFAGQNVIGGARVYLMARNLLTVTKYKGFDPEAGGNVGKNQYPNSKQYVAGIQLSF
Lipoprotein RagB C 488 Porphyromonas Gingivalis (Strain Atcc Baa-308 / W83) , Porphyromonas Gingivalis W83 CELDRDPEGKDFQQPYTSFVQTKQNRDGLYALLRNTENPRMHFYQELQSDMYCTTITDGNSLAPFVNWDLGILNDHGRADEDEVSGIAGYYFVYNRLNQQANAFVNNTEAALQNQVYKNSTEIANAKSFLAEGKVLQALAIWRLMDRFSFHESVTEVNSGAKDLGVILLKEYNPGYIGPRATKAQCYDYILSRLSEAIEVLPENRESVLYVSRDYAYALRARIYLALGEYGKAAADAKMVVDKYPLIGAADASEFENIYRSDANNPEIIFRGFASATLGSFTATTLNGAAPAGKDIKYNPSAVPFQWVVDLYENEDFRKSVYIAKVVKKDKGYLVNKFLEDKAYRDVQDKPNLKVGARYFSVAEVYLILVESALQTGDTPTAEKYLKALSKARGAEVSVVNMEALQAERTRELIGEGSRLRDMVRWSIPNNHDAFETQPGLEGFANTTPLKAQAPVGFYAYTWEFPQRDRQTNPQLIKNWPIHHHHHH
Lipoprotein RagB D 488 Porphyromonas Gingivalis (Strain Atcc Baa-308 / W83) , Porphyromonas Gingivalis W83 CELDRDPEGKDFQQPYTSFVQTKQNRDGLYALLRNTENPRMHFYQELQSDMYCTTITDGNSLAPFVNWDLGILNDHGRADEDEVSGIAGYYFVYNRLNQQANAFVNNTEAALQNQVYKNSTEIANAKSFLAEGKVLQALAIWRLMDRFSFHESVTEVNSGAKDLGVILLKEYNPGYIGPRATKAQCYDYILSRLSEAIEVLPENRESVLYVSRDYAYALRARIYLALGEYGKAAADAKMVVDKYPLIGAADASEFENIYRSDANNPEIIFRGFASATLGSFTATTLNGAAPAGKDIKYNPSAVPFQWVVDLYENEDFRKSVYIAKVVKKDKGYLVNKFLEDKAYRDVQDKPNLKVGARYFSVAEVYLILVESALQTGDTPTAEKYLKALSKARGAEVSVVNMEALQAERTRELIGEGSRLRDMVRWSIPNNHDAFETQPGLEGFANTTPLKAQAPVGFYAYTWEFPQRDRQTNPQLIKNWPIHHHHHH
ALA-SER-THR-THR-GLY-ALA-ASN-SER-GLN-ARG-GLY-SER-GLY P 13 Porphyromonas Gingivalis (Strain Atcc Baa-308 / W83) , Porphyromonas Gingivalis W83 ASTTGANSQRGSG
ALA-SER-THR-THR-GLY-ALA-ASN-SER-GLN-ARG Q 10 Porphyromonas Gingivalis (Strain Atcc Baa-308 / W83) , Porphyromonas Gingivalis W83 ASTTGANSQR
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-08-20
Deposition Author(s): Madej, M. , Ranson, N.A. , White, J.B.R.