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6SG9
Head domain of the mt-ssu assemblosome from trypanosoma brucei
PDB DOI: 10.2210/pdb6sg9/pdb
Classification: RIBOSOME Organism(s): Trematomus Newnesi
Deposited: 2019-08-03 Deposition Author(s): Ban, N. , Bieri, P. , Boehringer, D. , Calderaro, S. , Horn, E.K. , Leibundgut, M. , Leitner, A. , Mattei, S. , Niemann, M. , Prange, C. , Ramrath, D.J.F. , Saurer, M. , Scaiola, A. , Schneider, A.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.1 Å
Head domain of the mt-ssu assemblosome from trypanosoma brucei
Ban, N. , Bieri, P. , Boehringer, D. , Calderaro, S. , Horn, E.K. , Leibundgut, M. , Leitner, A. , Mattei, S. , Niemann, M. , Prange, C. , Ramrath, D.J.F. , Saurer, M. , Scaiola, A. , Schneider, A.
Primary Citation of Related Structures: 6SG9
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| uS5m | CE | 435 | Trematomus Newnesi | MFRLTAASQKNLNSWYTKGTMRGGVPRIYYAWMRPGSFTRRRFEKMRNPFVDLETGTSLYFRDTRDSAEAIAHAADSKGIKGMDNAIDLYNEYRIVPDLYPEGFQWKHKLNTEYNQWRSNTWLTPDLIPKEHRGRFLCNFQLNIVAYDMRVVKFSPKDHRQWIYCVLYVGSGKGIAGWGRAVAPSTQEAKKEAIREAFSNIIAVDLEQEGPMYPVRVNADGVRVLLYPARRIVANFRVADILCAFGFQHAGCRINLKATNNPKSPTHTVEGVFEAVKALRSVSEIAASRGKVPHSLIYNIYPYLEEIRRRKGMMAMHPPGKDGLLMPDRVVDNRLPDHLKRGYYDDVYWKDFFAGSDEHLNEPRMGLRGDEMRRRLEEAQTSPAPTTAKDTRRRTLEDVLKRLGKTTRDLGSIPIVNPRVDVGLPTHIKRNYQLH |
| uS10m | CJ | 817 | Trematomus Newnesi | MVRRSHVVAYYWSRYRMPTQMPKFDGPAPVAAPQSMNSTKTNEFIDPIDDKFPMSIRGPLVRPDVPEDQYVDSWYICTSMTHHMGDYRPWSASAPPNAFRFRPFNEFDAKGREYVQYMREFARFDPRKSRGNGQKGFPFRDAYLTKMNEANQKTPPPTLETIMDRAVREHHQHARILSPLEVQRDVGRLEPIPSYAGKINADRSVFPFQWKTEDWYEYEVAKVRNRRFVFENTEEDGIRGSEVTYKIVLEGFWDHHVMKLAEDVCMFLKDVGRQIVEEKLVAVRRLLQGGAVDPELLAAFNCARAGPFGGLDEYDKEEVANFLRSDLRRLEEQCLSVINRCNVPVPGATNIYDPHTSWPHVEKLEPWVRMAEFWTSSSDTSFTELEMSTAHYEFRKFFRVIICKLPFQSTEFEKRMYDIRHWLHRQTSCEFHTIYRRNVIHDSAVFPTEHDPATPTTHEHHRMFSFALDWQSAPVNRLSTDTVHEGESWDAVAQRLGCSVGELKDANAERETIEAGVVINVPVTATRRLTSFGATPLVLPLKTTSAKDGERIRTWEEAAAILDCTVEELQQCNGHAALTYQKKESEAGEFDSSVTELVAPLSCWTSTSESEFSPVERVHANDTLVAIARRLQCSEEALRAVNDGITDVSGLDFVRVPPEARRPRRLVEPQLRPQAATDALLARTIAEEETFKLKSIPHLPQNAERFPHEYHTPTSRFPPTPSETPATQDWMAYTAKYLDKQFTISAEPAPVYNVNKLWPMQQIPGKVDQTPFEEDQTWLLHSIPVQQLEMHHHEKDLQDLPFINHEQFPRSLEWNAP |
| mS38 | CN | 250 | Trematomus Newnesi | MRAGCVACSRIPKLGIAALGSTTTSMQATCQETQELRCATTQMAPAVIFPLPPPLRGSYIDRKPTAASFNEHHATASFRHHMIASADVSHRPRHFYFASGTRNDTGTRSVKEGERKQLKQQTNVEVDSVAYGDQLDELSARWAAKFYGQVTFGPRNYPYPSSRWLARRFQMKKHRIIKRFRFRRYKLAAVANLPFAKMIRVGMLPELKSSKTKRGDVVDPTLSGQLVSAVKNTGEKRKGQRTRPKSKYQV |
| uS19m | CS | 244 | Trematomus Newnesi | MAFRNTFTTPGKFSTVSKNIVLLLIWRVKVFLRAEGFAHSLVMLPVSLYSKILLCDVKKKIVYFHCCTRKKSMLRRCPCVWPDGPTKSSVSIGTAFTLQKRFLKIAKSAFGFYLARRGQRKYPFLRRPHIKNTHSMNPSAPYFWSFMTAKSQMAFLPEENYITGDWTGKFFVSKRQVYTLQHATSGAKVRVKSFPSIFEFNSPSRWNIGKEMNTLTKPRMDLIDEQMLTKKQRLDYVRAGLLPK |
| mS29 | CG | 498 | Trematomus Newnesi | MRSKTLKKSLAAMYMRPPVTCYTDACEAPVAMWDGAIPLKETRKLKNGVPVRTVSRTYSHPPQLTPTQLSFNDINSMYCVGNDELIQFFPEGLGGRVFQTMPPGHPRGFLYRKETHLLNLFVDKVQHWHTKRSVLSSLTNGRTGFIVDGPTGCGKSALMCQVVHFARSRNIVTLYVPDAKVWTHGEWCWPSTILPGFFDAPDAARSFLKYFAVANRATLTSWKLRCTPKDLPTEQGERQPQNLYELCEWGHRAVAPASIDRQSVCVKFLMDELSEEKKLPVVIVVDGWNLFSHETHFRYPHPDFLRGLASFNESSTDIDLYPQELPRIPASRLSFVRGLNKMILSGDDPNKFFITCTTRDFKPFDGISGFPNVETDRFANSLDEYAPYDPEKDSHFHPIQIGNFDEYEYRSFLRFLINSGELAGLGWGPLWHASSDFERKLYKIGFLSGRNPQGVVDHYHQELVWRYDYQRTRQKQYLLKRRMEGMSRGASSGAVGVR |
| uS9m | CI | 443 | Trematomus Newnesi | MQKLLSPRTARHARLFRLAGKLADSGSPGVPKSDGERLVWVNSHVRRDKDISLSQEEERIRELMMPLEVGENSFAANGQATHGNLFYFREYPMYPGEYVPAEHNTLSSLRDELRLDLTAQSLKEAWMRVSGGVYFQSVDEYYASVDGLDAEQIGEVLAALFPELNCYEAQALVQRTLECISRPVSAASRQLSRTITAEAVGLDNAPGHYTNFLEWMGRLTETRAFKTEHALFEFSRRKFNRDDVRVMFENYRLMSKATLLADSADSYSHFYTVLKDFARKVAGEDSRHQIGVRIDEAEVDPETGIAVGRGCADGEKYHFTALLRENRDHNGIITVMGKPLSLVLDNKAWLMEMVLMPFDEANLDYRDFDAHIVSEGHAMPSIANEIAAFALRMAVANALVKLIPLTRIPLKKSGLLSVDRRRERGQFPGYLDGKKVKRRFAKR |
| uS11m | CK | 326 | Trematomus Newnesi | MMRKSVTFLRRGKPRPRAGMFPDKYRRVPMLLKPQQGGQQYFNHFLIRSTNDRLTQQDVDNASGQAHSFISPQLPQMDWRNMSARSSEESIREEMRQLAENDVMQHQRVFNERMWYEKEEEHRMKARSCPEETSEHAISNDGAVPPPRVLGGDYFKTRFGYSLVKNSEMTQGPVDYSQLDMWGEMPRYTSDMVFLYLVSRRRNTYAVAYTYEGKRILNTYTAGNRGLKGGDRGFRSEGSTDNGHQVTSMYLNDLLPKLREMRASEGRPMGRGEKVELVVRVMGFYNGRQGAVRAVQDRANEFHVRYFEDITPFPLNGPKMPRGVFK |
| mS49 | DB | 1181 | Trematomus Newnesi | MIRRRVCDGARLAPNIRATFSAVRYQSGLHTFIRDSKPSNFSSVRRSENANGDATASPGATAGENPASSGDWASHMQRELFGEVDPLGGQAHKDYYRDVTRGYSPQYAPRNFANGGAVAYPHIQSPYEYEEAAHRRVWLDHDVDRMREEFTQHRASLRSLASAQEREELLRSRAAEYQVANTVHESESVHPIQQLYNSGGTSRSALKQQAVADRYSIAEQHSPLPLTTGVDRDALDEAQRTKDRILNDSFTAENLLITHGLREKEKHDFTILQRTVRIPFQGYDMDRFLAQQKGTPYGAQQLPPNVVPSSMEEAQRTLRGSSATATPLVDAVAQKVYARNTVVDRPAIGEQLTEQIINIMRASRTTAEQQREEERAQRFGLGRQGALVQDGGPDQRTLKKHTNDERIVDAMLFQQNAYRKTPTDEHWNPYIRRSTENGVGHLLQNKFDIMRREDRLSKGEQDLTERNTIHYGVPIQQIVDEFVFRHRNARGERPLDYFKPFPNFRALRLNRMYRDVEGFSLMKQRPEFLEWELFTRYRQHHQQRRRLALLHGLEPVANETAQERDTRRHRLDEICERTPFDEREMRVNDDEMRVSVETLRSWFGVYMLPSPTVVNAVLGGSASVNLHLYHLADEMGTADTREHVLSSRYLNRLLLLESYQNRVGRGFMNHVVGRAPEPVVPHEQPQEVLRHFSAEERAMYEQHVKEQTSRQLGEWERAMKRRRWLTDHQQYGHVVSHGLETSVVDLSHTETGAVLTVSTKAYEQEIEAVRMKTNATIKVDGMVYNLLPNSERRVVPLTVQLDSGEKIDMTSEDFDRCELEAFPRNLNHALNYGIANYAYNRGNYVETQDSIWEEQTASGQEGWSPATHADGLREGLPVRARRPIFSSSAEQRIAGGPQRAVIIQYHHQPFFNPEPRLVKVAFQCDGTIMEVPISDVMIWQRRYHGPERTVGDESRRYNPAAMRRYVDVTDPFNEKTSNTEHFLDKYEPKRNADTVADKYRTTKQITEIDKWTRYDSARADNYRPLSISHRRDYIRMGYIPRYTPWEWIAIQEADQPLIAEQIRQDNIGTSYFFSLNRYWRYKASPHGYIRHFENEVRDLLQYVDGVTPWKQAQKIRTYWEVRSHHPMPQFNRPEVAMHRNTVGLLPAHMWETDKKTGKVKSVKDSVRDYQTKTPYPKWVQL |
| mS50 | DC | 1165 | Trematomus Newnesi | MFRVRRLAGFIQCSPCGKMGPLKQQTRRYTPIWKSDPAVDNVAPLRDEDERRALWAEVGPISDVGSAVTAWIRFGNDPVLHTAVPTMLGGKFRNQQREKESLLPNSSSPFAYVEDYMGTNLVFGSPVHAKESAAVWATYFERRYASRLRLSRRTVANYVGLINSPEVFDDESDRPETRWSQDTFFRECAYLSEKFLKEKVSNMQQFEAALKRASPEAYLAFFDAFQQQTQTQIPLPSPSVWHYEGERRKQWAEKFISISHKAQAFFKDVLSEDVKKYQEVPGKLLQKVKPVLADVGKILVKRHERWLKGRVWTSLTEEEREAYCMKEVKRQQMQVEDGEFDPMMEDDVDDTELEEWQREHDAIMKLMNSPIDGLHFTTLELWLHTMRCEELETEHIYTSARVRAIQVAARKKLYDTTSYEEVIQAVVESIARGTLDLGAGVLRPHFNEVWCQLNYAKFGSSTITQHTTTSRRQLLFFHAGSLKDIAATATLYYATKPLSNSLDYASPYKYRRSLITLCSNYGVETAYTTQRPLLRSAANLARAEDLIHAVVTAAAQPFGERRRAATRDLHMEFQRLAVPVERVIVANPVSALLESGADPDEKPVEGEKVNMWPLGAKRVVLYKWSAPNVEKLKAMESDAASAVSGSSLTAKRLREIQELKRRGFLEVSLWRRVTAQERKQRNEIVEAKKKQVEEVVRTVPSLAHLHQYATSLYSRIEERVAFPTETSTVTETTNMKEETNKPLEDSEWEFAVLLDDRVLLNKEESVELYLPYRDANGELLAQGEYRALVRAFDLEANPNLHPAYCSVGYSESFQVFDALPQLIAQFFRVKDATAEAAGVTHIPAADFTPFCAFLRDAGLDVPLRCEFEAGQAVTTDGDVYMDYFLQLLRGEAFHQSHAQAGLTEAQRAIEPLCRAHWVVHHPGADESEWATARRSVLDHAMQHEREWWFPNEMLDVKDVVTGSTNGLTPQMYPAAVRYGVELCTVLTAEGKFVDERGSGLSARCVVNGTGAAESVVFDTANCNGTNTTSVEDALRVAHGALRSAQDRHNTLAAFRLGPLSKQSQVLLFCGVNAYEFGGKYARTYAYAFEKAKKELEATAASGFMAPSLSHEDTERLSDQPTTSPSVDRFASTTHPEQRKAQFVPRVGPGSTPLEDPAADQKSEWS |
| mS52 | DE | 747 | Trematomus Newnesi | MRRCSFASTCRYRSADDVPLGLGSAYVWTCRNITSRGQFNPIHNFSYAMERGVRARDVKAFEKLITNPGPLRVAYTPDYLDWLHRCYKAKGTYMDARAVAEKKFNGNIVSSELSAAVNRREGKRGDTRGDTVDNDHHNLPGAPPPGMFLRPAHSFRRLAGELKRRRAQSILDEVARAQGMLDLFERQPHFPAIHIDRCSRFHLVELFKEMVLERSLDSNMIWEKALLYRAILSERKPSYPTSFHYIFTAVEDTVFAPTISTPMEMAGSGGEGHDRSSHPLAAKCPTLEAYYYYVYLVKKYYIDNAVEAHVVLRCHREPNAADLLFSNPPPKDDTEIMKAVELLRNADIQRGVAAAAAVSDPTLPPGGEGSVIGNSDNKKNSEKTSEGSRGRPARPPVLPGAYPPIDMLWRCEENLPLLKVLLFGEFNLIVSENPFVKFPSAHGFLTRPYSTDSSRTLADGMSLANVMAEKRGHLLPSLPRNTATSIDARAQDIRRLQQKHHRDDIVSFQKLLRSTHAEDSPSAFSSYSDWSYFNPRAVRAEERDRLTRKAVEALKLYDSATNDIYRHSFEDVQACHTQRVTERDRTMPPYLPTLPHFVAIIKKDPHISFLLHIGLPDRNSSEEGSAKHKELEKRIYYLARALYHTALEYHNETVRRVNRQKVNVAASLLDNFVEQEWTTILRDKHDVTDVTKTLNDTQNDKKQLARRLGRYMLFANRSLDDTGFPTDARADDYTRWMAPPSVGKVSL |
| mS53 | DF | 666 | Trematomus Newnesi | MSVSGVFSKGRGIGHEATTSILRYIPRARVPWQPSRFGRENLTAADMARLWSRGRYRDGPGNYNSGYCTERTHVLEENTVSIIPRRELEKYMPDITIGPKALVTPVSLMNARNGHRVTHDLLHSYDPHIGRLGKPAVVDHDNITVEDPNRVGLNAATLDCRGRIYRWLRRGPFFQVDNYFRRSVKLNRDGTLPTDFVHEAPLMRKIIRLAHRGHLKAACEEYRRVTTVPPVEVYRALTACCVPGAKLADAVSIFEDGDSKLFYVSRDGEVLHNLMRCAIAARHRARIMWVYNVMRGRFYENVVVRAEVDLIWRYRIAMIALEYLLDHECAEEAAAIYSYLVEEELLRCDVHVRVGLHMREAIAAGKPITLNNDVMNATSLVRDATAVAPEVARELQRRHAQTLQNNAVEAVGAENVREGSAPWSILGPLTAIGPTAEDTMVWLQQHYGDVDVMSIMRWARFRKGKDLMAKDRPQYLARAAAWIELLSKRNREMEEVPLTYMRKSKPLVLDTNSNVRVAWQTPLMRSGGPPRLLAREEGYVFHHSNSSRFVEETYRHPGESLQSRYLALQPLHTEVSAKEDFQRLYYQAQKHHKQQERLLPVSTAAIPSRIVHHSVMSALHGVSGKGEPANRSLFTGNKSNDSHSNTGVASGTSACTDGAGSATPEF |
| mS54 | DG | 631 | Trematomus Newnesi | MFRRAIPLLSANIPRSVWDPAQHNPNWSDSYGHDITNRRAWPARKWTVGLEPCTPREWLQFSHRNLAYAYNGALRACHSLPSMLLLYKEMKQRGVKVDVDTMNVLLTRAARHEHIQVDDVFLLFDELVALGARPDLAAAETLHTVLSHSASMPEEWREARRLQLVELYNNLAMEEVERLAPHRADRLLKEQMKRFRGNLQQLGSGLRPTVYCRYLHTTHTAAVLLEEVHNFLWELVPNDHPAMEIPALQLRVPFVASVLRRPSVNPGVSLASVSRAEFGDTDVCAVFLAAAERMVDADFDDQRPVSERRLFLSLLTMISYSGVLYTSDLMAQLMEMVKYSNNDETRDSDAQRVLRYALRGSSAAQDSASRTLWHSVEKVADCRVVGRYIGARNPWNPIRVCFDEQGVFKAYPISTTTTTREVSPPEGNGAVTQEQRASCVEGRTLEALNMRWDDVRRLIECTGVLVTPPSERCPQQQKMEVFTGMAVYLRTVATGRRYEGGEDVLSDGAVATSSCEQRRRGTLFAEGYDFDVWVRLFSLVQEVRHDMEKFMADHTLQCVEPEFECWEALLVTLRCALDFCVVQMQGGGARGTEREVVERLFRDVVALREELIEESRTRFGGRMRVLWLQEA |
| mS55 (KRIPP8) | DH | 581 | Trematomus Newnesi | MLSQNVAKTTVPSYYMIRTNLPHRKPQNQWEGVYYYSGITKRQRHLILLHRKREREAHMRSFNISRASVLQRLEQLSGDRKQESLPPHVRLDLAVRLAQHGLYQQATPIVDELHHQKALHAGHYALLINALACPRLGQRILHCDAQCDPALTYKLLGDENGEERAQEAYRWFDLALTSLAVDCGGRTQPSHFVPYLPQGTAAASHITNALMRTLLTCGYTHVAAIPDSVYDRMGSMGISPTISTYELVMLALSLQGNMVEAESILSFLRSHHSEHITVESFNALLLGHREARQFDCCDAIWQELVDRRWPRASPLTAELYLRSIMDHANTPTSEPLQSFANINVVEKKKVPLVLAQMDELGVPRTHLSRVLMDEVEDSLRKFQTYRSRFYEWGRAVKQFDFIEFRRRNGWLYDLHLMKCTTKQVGPLRDFNDPDAVQGAVATAEIPAFFNERPAWERPPLEETLYVTTNKERYDDVRGGDIYYDDTRGLHDRSPTWMNEVPETRYDRLYGVNHPDIAKIGIRRHLNVEYVNRKEVVERDAALMKKTLSSGRRLRHRVESSRTHRNAGSLSGISSTAGGGSR |
| mS57 | DJ | 396 | Trematomus Newnesi | MFRSTRPRSVGYTPVNPDTSPMVAYSQYHWHYNLPQGMERPHSVNRTFAAPFQSNHSLVNKYRGVWIEFDMHPAFSVALEPQLRKLPRGRTLPKTPAEEVIADYTALAPLVDDEKTRDLWLAKVFQHCAFQRCGGAMELWERYCHQRFTAEGATAKPPLSLVKSVLFYCNKTDNSGWRALFDRCLKDGWNYTPLFDTAQWSFMLKSIGRMGDEDGVRAVLEEMLDVQADLDRVEARSVVIALNAVTNADVYEFVKKYLFNFGERKVKFLRTTYSDLRGHGAGKLRIPLKENDNMYYHVCWHSSIRSPRQFSPRQLYFDYTPSTLGSSSHNPNAKIDDIVKDKIEKWKAEGLLPEDYVHEDRVYDRSAAFKNVARQEKWKKMPKILKSKRMGYTGDP |
| mS58 | DK | 324 | Trematomus Newnesi | MSFRYTNNLIGALKHRLLLESSYREIASRKFIGNCRGVEVVCSGYGTVLAVQLTDKAVWESFYRKGGRPTVSGGGDVSGDAETGTQGSATTTGATGSLDLDKLAESIKTALWDATRKIRSAKEAALHRSLSHNTRMRASADLKHWYEEDANTLRPLAFEALKHEAATPWMQLVQHGKKEEAAALLKEFEQKGDAAEATPTRVKDDRVKGTRTELSNREQPPLASTLKAEDSNPATIPIGSVHPLFTPALVQIEEAGGGSVSNEAVCRAQLWELSRDEQLFWERVELIRKGQVASIGSSHKRGYADEAAFAKDDTEEKVQLRFTQ |
| mS67 | DT | 247 | Trematomus Newnesi | MLVSYLRLQADRRTRHHMMVDGQINPREWFNWHPKEYQPWYFDRHKFLYEQRQYAQFHHLLCHQVYLKDMLHLMRYPEPYTHIIDCRTSTQKMHRWVPHSLWLPRDEVEYALQLSADEFLDMYGFRKPDKSDDVILLSHNGIYSEQAGWEWKKQFFQHVYNYRGGTNELFGESYSDMNVSDVLSPWKGPFPQSGVFVDKWSKRKVLTRTGPFDRQYEMQDFALPDLELEKARHPEEGPRQNMPFGLQ |
| mS69 | DV | 183 | Trematomus Newnesi | MRRVRDGLFLSHPSSALQCSVAVVSTGEFDHPPFQFRQRHTFNTTPLHDANRFGGRTAYLREIGPVNIKKQGRRFKKDPRTVQFNVDVWCAQQTLRKRWKQRDWEVIEIPFRLVPREQQRVIPELYTDIPQMTDPARNDFSNIRNKVYDREELQGVLFPAAGAMLYPPLQRVDKQAMTLDKYL |
| mS70 | DW | 179 | Trematomus Newnesi | MLRFTHRALTATPERFSVLGTTHPKPKRTGFGRNNKMRSKPSDNVAWYDKGPVEWLPRPVRLTYDHLDQLQQWTMRATLDGRTEEFNRIRDLHREWSQHPLMPVLGDVEPKFPLNLFKQNHRAKKRFLVRWHKANTPANWLWMPRGPTVVTPLHRTNPTQYPENWKQMVQRKSGTGTPS |
| mS71 | DX | 169 | Trematomus Newnesi | MFHRAFVSSSDLTGCTIALSSVCTQKRYWAKPKKRPKVGQGFHEKAQKWREEYLLDRHRALADSLRAYVEFSTSKRVEPWDARFKPFDRIEKDGVYVLMRYMMEEKLQLCNYHHRPVKRLFCNIGLMGPQITTKARWKPYRFATNPAGTSKAERMYQRDKTVYTHGHND |
| mS72 | DY | 163 | Trematomus Newnesi | MLRSTLTSLNTFLTSSVATPPISVIRTGPKWWAHPERMVRQKLMYFTLGVDQLPLRRTAVIQRDLQRFHMCKPPPRVGDSTGYKRSRAAQLNTWYRRIQYQEYHMQHLFTRHVWGLLRVYPGNTTKIQGKADDGYVGYDSVPFHRYNRAPLPFPARELYERRK |
| mt-SAF1 (RSM22) | F1 | 1041 | Trematomus Newnesi | MFFRFHSTTLQTCLTSGVARSSVAVAVPLRAGCTRREMSSGGDGVLEGAMHKPGESGLQAGSSTTIAGKETWSQFSTKMRYGRRRIRVIDVAAKMSYEYQMLRKMCKRRPAMRQWAVRDDFCDMNPGVVIMSPSMQAAFMKVFRMKEKGLIRQCLRDIVPVIEYRNREEPARLPTNPADMIPEGEPDTLNQKKRELFERREKGENFADLRLHDKRSQAKLRFRIRQRLLKFQRQLAVANAIASRSVLYSTNDAIGYFLFRGAAMYAGMHRVFFELSKQLPHFVPKTMLDFGAGTGTAILVAKEVYDPGSLAYPLYRSLRQTMQGNDSSRTHQLSELRYDLKRLQRNNEEKKKVRFMAVAALLERGEVDPADLPEDLKREIAEVATAAATAKKDRLVREAHARYRDVVDGTEWESGDPLGEVRASTEDPEDVIDGEQGDGGDDGEAAKGRPKTWWEKLIDVENETARTRAARRLRPLQEVTAVEPSPGMMEIGTMVLHDDVPNVTWKRYLLPEDEAIQHDLVVAAYSLSEIATSENRRRIVQQLWKMTKGVLVFVEFANLNNFNILMEARDWILEEKDVGLWDWQPTIVAPCPHEHRCPLRHCKTGVKRKRMRICSTEAHYRSTFVEVWARHMPLKVGIEPISYLILARNELVPERAERRREQLKKAEEMKRRERDVKQQQLHEASLAVKDVVFERLSDEALHRVQSSVPQPLTDIDEVREASTSATSTSLLKDLKDGATSTGEIGHMPTDVPRLVKTGNTRHNRLIFPLQFPPATHKFNRAFVDAGYQRQRAITPAEMLVVRQEVEQLQQRVMRAAPKYLRVVRDPRCHGKVQADFCTPEGDLVSGRVYRRFYGDRNRVSAHSTMRWQHIGGWKLLKRIRRGSLFPHNVPLYAVTKHAQIDFPNTLLDTKHSTVEQTAMQYNDPMSLVEMPDDGLTREELKQKRRLQRDVELQKKVEEKLEDIFGVNAKDWKTDDLGGGRLDARREISEQQWADAVRRAKIRTVQHTKNALPFAAKKRAAQRALQVRRRNVRLEMSGNRRR |
| mt-SAF4 | F4 | 811 | Trematomus Newnesi | MRIATSPTRRGKNSSVLPLLRRFSWGNGMCSPYYTEHRRQSTLTSSALSSPANHNQQVVYRSIRDCRERAFHLIQELVSSPIPGCGLSYSTNGSFGGPSLTANAVSGVASLLELYDKAYYFLHLLHRTILVPRNVVRDTDDFTEFLLRCFRRPSDSLLKGDEELQLSDAAIVDGFVEWMETSLMSAGQFVSFVEVLQLVGSYVRYHKGVRWGARPSEEEWYRCGYRLHPWHDTYCPSSRAEQMPYVHLLQWLMRAKPTKLEEKIDNKEGAHGASSLFSTAAKESAMRAWYATEEFSPPSWHTVVGNSNRLGFTALDCGCHSGYMTELLLKAGAQEVLGVDVSPHHLGNAEATLSEHLRERRSSSHSRKTVQFVRCDILPDLSDEARQTKTPPLGPEGSTNSAAAENRRRLARCHHMPSDSDGLKTETEVTGPFDLLLFHPPLPLLFPTWPLFHDLYESVDQLAYDAGRRHPHCRLSVLNEFLQRLLGSSNGEENNSERRRNAHQQLKHQRRLVAPLIKDNGYVAFILPRNFDTRAILQRMSTSSAGKNCTSCGSDGLAPLVPLSDVVTMTLEGSYTLVLKRSHSLSSLLNRMDYIQKSISAFIRAFVSPQHRSRVEQEVRDFYSNHQAIDLIVMRKIARQKTNEDNNNKDCSVRAVLQKVSEPIAYEDSFEYEEYIPAGGSPLAHHWTEMTPSFSYLEDEFFGCADSVGTNGPPNGASFLAVGHPLVPVTRQLVGVDRFGAGGRDATQGESGNFDKMFAKEMRRRGGRMRKMALTPLEKQEWYIDEKLVKSEAAKVDLMNELSRFELKDFD |
| mt-SAF12 (KRIPP18) | FD | 579 | Trematomus Newnesi | MLIRRLRRPHSTVRGCRISSASNSDSAGAFSANGTQLPDPPYYLPHSPRFDAERCGTFNKKWLLNLPALKPLVRNSTYLPKKEELWRAPTHEALETIIGHLPYHDALRYITEHSLFLLFPTVLRARDAPLPHVIYEDFMKSCTFASLQNPPEEQFALPSVLLRTLLCMAAYHCTLDADYFTTCQMLFGRMEQQQQTTPEVLSAWVYCCTASGRVDEALTYAKYMADCSAPFDVTVFSLMQHPSLNPIEVEDGSVPHSAKGLLLQRRLGNRLHTAYRSDAVAAHGMFVYYALTLSHVRKWEVIRAAAALGVTLAERTVVLAVEVFAREKGMRCGPKTVKALTHFLAQDGTVGHLLYVLLRARKNELLPEFRDLPHTTFSEEEQELVLQCVAQRARHDDSFAVAATLVSSLVREDDPSELLMAFARAARNHHSADVCGGDGDGSVCADVPAPVPESPPSNSSEIIEKDRWAVVQASVRSLLLDVNALDQASRRDAYHKHWKNGNKGVKNKENVLAKTLTLPHDSMHTATIQRKEKELWELMRSDTPVGVRELAQLNIMEELQEAKRLERAEMAWVNPDGTF |
| mt-SAF14 | FF | 474 | Trematomus Newnesi | MKRIVVPHRWSEMNRVEHPPLMMKQLFQGVCGGLRWLETKSLAQYLAVRAIEEGYPSTPGVRKALHVKRAPLQKRRVVQRSTKSATAACSLPTTAAPAQLPLTSSGDALTVTGGLSLQVTKQKRLVSYDVLDCTLGSGYHAGAVLENGGPYTRVVALDCDHDAMHAARDLVEEFGGDRFRFYCCKMSEAKAMFGERSFDAIMIDGGVSDTQLEDPERGFLLDDEGGHRLDMRFGPQMGVGALEYLNTVSQHTLVSSLLAYGLLEYGQAMKMSRAITRRKPFVDSREVLTCIEQAGDELPEGGWRSQGSRRKSPMSWKFLTSLRCIINNEMYELRQGIENALLMLRDDGRLVVFSRLPWEERLVRGTVDDHPHALLSYVEDISIDDVQIYGFTRHAKMWVITRAASSAYALKNTTTLTEEKFRESSVRWLTGMYAGQTHGFPANNFTFENFERKEWVTLRRNGKPPPVDVGLDDK |
| mt-SAF15 | FG | 463 | Trematomus Newnesi | MRWSAVLCKVSKVPTRSVIPADALRYHPRYSVPRKMVLSNTFNVVGENNRYTSLKLILEKLSGHVGRRQYKMLCNLEKHYDKLKDEGIDWHELKWLSREELIVLFDKVLHLTRTERAALLPAIEAKVCGVLRQTDSRHSTVVCMNRGNANHGWRCGRNGHTNDVYFEGKAKANTAALQLCRRSSVRSVERSGVLVEVRSEPDFSVVGRFDHSLSPRVWSTPENPTFQVTTIGYEFRVHQEDPRVIPQIVEAAEEWELHANITKQVIWEMLEMYAVERDRQPLDLKPGEMGDPDIPSRHATAFNVQVVPPLSEGDEAIQVVEQRIVRADGSEVPWFQEPPPQLFSGGIPVILPFAPSIIVKSTFRQVTRSSAQDVTRQLLQPVVDVTCFLHPNVCFWWNAEDEQRCLGHIVDYAKRIPFALPFNLYFRVNLSKDLRGVQNYTEELGKRMSMKAHYFNLRSYGVR |
| mt-SAF16 | FH | 457 | Trematomus Newnesi | MLVCCRSSLSLLARATMPLCCSRRFLTHQNNIDDISGPVDTNSNSVSDGRLHCSTGEGGKASTCERVSLRTIAESLGAAAAAELRAEVERDTRDGVAAIPPLPPLGWRVRHPSGSNYFVMTRTLKNGVQSAELNNRRYRSVHDIFLQSLQKGGHKYAQKGKGSEGRQKDAKEEEEPPSQEDGKSSPKVTVGYDREGRGHRATLQRMDELHDSPKLSRADVHLTVFAPFRVYDPSLHDPTVDICEWSSFDLVVQKTVPDNMVANKLLQPLSCTPQDGALSMYVCLASVNSEMRIRSIQLLSMKEAQALVEHACFGNGEPLFLELLRRRGRRRPLVERRFDDPRLRYEEVAQPQQVADEAAVACSSSCYGPYYPAFEMLMDSCGSAGEYSRALCYGGPYVSELSRELCDALLDYIKGDLGVSDQLCEYVCQMQFFLEQEEYMTWLGQVQHVANAVSRTA |
| mt-SAF17 | FI | 445 | Trematomus Newnesi | MQRTLRSAARRKWGQKTWSPTATNGGAAPANGVSAQEALQIAYRPMPPSQTVEYEEDFGHNLMIHREYISKRCRDRVSFELSALSYSNLELRRGQEHLAGIMNRERRGVSVGASGAPDDQVQMQTDVDANSREVLSARYLFNERRLQFCDRFQNFFQSKLENSAASDSNGHEKQHLFSLMEACAVIFGCETEAARETYYRMFLGLDSETLLEEDEALRNRIADAKLVQRVLENNKGRQEVTQSPKLQQQQDQGKPLHAVSSGTSLLNDCEEERFISSIPELSLFEDETEARANGFVEGEDDVKANNGDLTAGSFSSPASSVNLPEEFEEYAPLYKAYITHAVGKGPVASYDISTLGSTGLTAERRRWRTLMEKIVREDYHTMTEVEQMDAIVLNEQLHTVKFFDLKIGDAIRDILQLLQRETGVGSSVNRDTPVGISPNNPERRV |
| mt-SAF19 | FK | 372 | Trematomus Newnesi | MHSSLIILRHAYFSALHPARRVVPGSLLPVRTQFYTRHFTSTAGPTCGDGGETYKSEPTKVGASVEGTNSGNGVTDSPSLFSSSAPTVRRRALPPSDFPENALLKCIEKEIEDEALRLDKEECPPPPPTGWEMYHAPGTSVFYGRRWWLPATASAETRATPERHTIRVQLTKRDPSLDPECDVRGEHFPFSFFVQRAPSKGEAVRRDGTFRMGDSAAAGDVKGRTEGKEEEEEEEELGLYDQSIEVRADFVDGELLVDNVVFHGTFKTGSSCSKRSGNTSPEAAAATAAGQHDNTTGGRGKVEEVRYNNIFNGYPGPNLDEAEEEVLDGLQAWLAERCVDDQFGEFVGQYSVWVEQQEYEMWLKRLRDFVAA |
| mt-SAF20 | FL | 353 | Trematomus Newnesi | MRHFRLNRCSYTPNLTSLTNQVNRSERLRKWGSAGVPPGVPRIPRLEAKGIAILHESPKVILAGRSRCNNFDSNQYMLINKATKRCLLVDASDDWPDDWAAFIGASDLTLTHVFLTHCHIDNIINLNAFLTICGSRQKQRVQVDSQDNDNREDDNGSDEIGVMWCPAEECWVQNFKRSCERYGRFEEMHQVLPMMCRSLYTPQHLVDPVIAGFSRRNARHLRRNDVLLSAATNRATSFIDFGNGVLLYYIFSPGHSPGHMMLHIPTERILFSGDLLFFNKVGRVDLPWATGVRLAESLRLLEALPDNTVVVPGHGRMTTLGRERRENKALQQCYQRQEIGKQEVSVGFNEGYL |
| mt-SAF25 | FV | 264 | Trematomus Newnesi | MMKRTILQRCIQNKSLEIARISRSDINSRAHLPFNFDVCYELGSREFTLFSSVGSTSVLVFCNVSSRRLRSVKGGQGETEFPPKRLNVKRRRQSGSADRSPVVFSAFVSMPTSGLTIEALCCSSLGLLVVDGVSFHQGPLTESMIPQDAHPGPEGHYQGPLLNQRSLAEMVVNTRGCITSVDPFRQQESFFDGHVNPWNARSLRFGHVPVHTAKPGFSDALCHFLEVFGVNDELAFFVEDFAHLVHREEETAWTNVLKTMMGGR |
| mt-SAF34 | FE | 123 | Trematomus Newnesi | MSRSTVFGPGSLYSFTKFGSFNRSPTNCTLNKRMKDIFRLENQKHIRNDFDRERRYRMCTKCGITTVTINFNNVPSARVGLWGRCADDKDYTHHRMVDITQREYEVLRESPVEKRLNWWRYER |
| mt-SAF18 | FJ | 362 | Trematomus Newnesi | MLCHNRLLLVNKQTQKYRTKLRYRFRQPSVVPLRQTLQQRHNTILEVLRRRRINSGDQSPYRYVEERLYSKPSRLDREGVKVNKTYALQGLGDLEPLRYGANFGISEKDALKYETVAEKAKYMEPPIPYSSLAARKLAAGALWPAAPDPEGMISKEVRLLRHESSMSPSARAFSERVAYHLRRSLKACPGHIAEHIDFTQLIIQEVLGSRRSKEIYIVWFTVDPGARFELEPRLHQLNHWVQQLIIKRVKRRPHIPRVTWIYDGGRLERELPRDVKQELQSFVADAATTLESRVKYLKELDTMNQRMKDIPWFMPYLWSKEEKAARQKSMLADLEEVERRKNEHSSGRSAPPRTSPPPQFVR |
| UNK-a | UA | 70 | Trematomus Newnesi | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| UNK-b | UB | 42 | Trematomus Newnesi | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| UNK-c | UC | 12 | Trematomus Newnesi | XXXXXXXXXXXX |
| UNK-d | UD | 59 | Trematomus Newnesi | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| UNK-e | UE | 29 | Trematomus Newnesi | XXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| UNK-f | UF | 9 | Trematomus Newnesi | XXXXXXXXX |
| UNK-g | UG | 167 | Trematomus Newnesi | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| UNK-h | UH | 255 | Trematomus Newnesi | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| UNK-i | UI | 32 | Trematomus Newnesi | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| UNK-j | UJ | 19 | Trematomus Newnesi | XXXXXXXXXXXXXXXXXXX |
| mt-SAF28 | FY | 188 | Trematomus Newnesi | MWRLSRSLRSNSLHNPGPFLDGALQLIKLHLAHKNAAADKNTKACSDIEGEFLRELEAFRACFTMSSSLKVAKLYTKKLHGALSYFQLYDDPLMRQLDMIIGKQTMQPSAGRQHGVFKAPVAARLDPFFLDEREETVLPSELPNPPKPDPSTPLRERALKVPAQHRGHWVLRDPDIAITREERRTDPW |
| UNK-k | UK | 27 | Trematomus Newnesi | XXXXXXXXXXXXXXXXXXXXXXXXXXX |
| UNK-l | UL | 14 | Trematomus Newnesi | XXXXXXXXXXXXXX |
| UNK-m | UM | 11 | Trematomus Newnesi | XXXXXXXXXXX |
| UNK-x | UX | 108 | Trematomus Newnesi | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| mt-SAF30 | FA | 171 | Trematomus Newnesi | MPPNSATRWLPFVSSDLKDYLNRYWAVMFTVGARPIETGHIRHYVSWYCTRMKVVLLDHHVYVEPLRQQLQEASRTPELPLLFVNKKLVGTLRDVELLEREKKLKDVLHFGFEWRVGGSVAATNGQKSLMGALPAPYGDAEFFRGRYRGPPVARPVVSLPTLHPFALRSEE |
| uS3m | CC | 74 | Trematomus Newnesi | MFLIHFVHYKTILQKYTFKFKHIFLSIDKYNSLFFNISGILIWLNIIHINIILIKYSFFILINNFEYLIILIST |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 9S rRNA | ca | 802 | NA | UAAAUUAUGGUCAAUUGUUAGUAUUCAUAUUAAUUUUUUUAAAUGUUUUAUCAUUUUAUAAAGGUUUAUUUUUGAAAGAUUUUUUGUAUAAAAUUUUAGGAAUAGUUAAUAAUAAUUUAUAAUUUUGAUUAGAUUGUUUUGUUAAUGCUAUUAGAUGGGUGUGGAAAAAUAAAAAAAAUAAUUAAUAUAUAUCAAUAAUAAAUUAAAUUAAUCUAUUAGUCAGAAAUGGAUGCCAGCCGUUGCGGUAAUUUCUAUGCUUUUAAAUAUUAUACAAUUAUCAUAUUAAAUUGUUAAGUGUUGAUUUAACCAAUAAAAAUAUAAAUAAUUUUUAUUUGUUUUUAAACACCAUUAGGUAUAUGCAAAUAUAAAAUUAUAGUAAUUAUAAAUUAUAUUAUAUUAUAUUUAUUCAUAUAAUUAAUAGGAUAAUAUUUGUAGUUUUUGAUACCAUGAUAAGGAUUAUAAAUUGAAAGUGUUAAUAUCAUAAUCAAAAUUUAUUAUUUAUAUUAAAUAUGUAUGUGUAGAUAAAAUAAGAAAUUAAAAAGGUAUUGUUGCCCACCAAUUUUUAAAUUAUAUUAUAUUAUAUUUAUUCAUAUAAUUAAUAGGAUAAUAUUUGUAGUUUUUGAUACCAUGAUAAGGAUUAUAAAUUGAAAGUGUUAAUAUCAUAAUCAAAAUUUAUUAUUUAUAUUAAAUAUGUAUGUGUAGAUAAAAUAAGAAAUUAAAAAGGUAUUGUUGCCCACCAAUUUUUAUAAUAAAAAUAACGUGCAGUAAUUAAUAUAUUUAUAAAAAUAUAUUUUUUUUUUUA |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2019-08-03 Deposition Author(s): Ban, N. , Bieri, P. , Boehringer, D. , Calderaro, S. , Horn, E.K. , Leibundgut, M. , Leitner, A. , Mattei, S. , Niemann, M. , Prange, C. , Ramrath, D.J.F. , Saurer, M. , Scaiola, A. , Schneider, A.