6S8N
Cryo-em structure of lptb2fgc in complex with lipopolysaccharide
PDB DOI: 10.2210/pdb6s8n/pdb
Classification: TRANSPORT PROTEIN Organism(s): Shigella Flexneri
Deposited: 2019-07-10 Deposition Author(s): Chang, S.H. , Dong, C.J. , Dong, H.H. , Luo, Q.H. , Niu, Y. , Qiao, W. , Tang, X.D. , Wang, T. , Xu, C.H. , Yang, W.X. , Zhang, C.B. , Zhang, X. , Zhang, Z.B. , Zhang, Z.Y. , Zhu, X.F.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.1 Å
Cryo-em structure of lptb2fgc in complex with lipopolysaccharide
Chang, S.H. , Dong, C.J. , Dong, H.H. , Luo, Q.H. , Niu, Y. , Qiao, W. , Tang, X.D. , Wang, T. , Xu, C.H. , Yang, W.X. , Zhang, C.B. , Zhang, X. , Zhang, Z.B. , Zhang, Z.Y. , Zhu, X.F.
Primary Citation of Related Structures: 6S8N
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Lipopolysaccharide ABC transporter, ATP-binding protein LptB | A | 241 | Shigella Flexneri | MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEHVKRVYLGEDFRL |
| Lipopolysaccharide ABC transporter, ATP-binding protein LptB | B | 241 | Shigella Flexneri | MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEHVKRVYLGEDFRL |
| Lipopolysaccharide export system protein LptC | C | 191 | Shigella Flexneri | MSKARRWVIIVLSLAVLVMIGINMAEKDDTAQVVVNNNDPTYKSEHTDTLVYNPEGALSYRLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWSVKADKAKLTNDRMLYLYGHVEVNALVPDSQLRRITTDNAQINLVTQDVTSEDLVTLYGTTFNSSGLKMRGNLRSKNAELIEKVRTSYEIQNKQTQP |
| Lipopolysaccharide export system permease protein LptF | F | 366 | Shigella Flexneri | MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVVTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV |
| Inner membrane protein yjgQ | G | 360 | Shigella Flexneri | MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEVLGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTDLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2019-07-10 Deposition Author(s): Chang, S.H. , Dong, C.J. , Dong, H.H. , Luo, Q.H. , Niu, Y. , Qiao, W. , Tang, X.D. , Wang, T. , Xu, C.H. , Yang, W.X. , Zhang, C.B. , Zhang, X. , Zhang, Z.B. , Zhang, Z.Y. , Zhu, X.F.