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FASTA Sequence PDB Format mmCIF Format
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6S6Y

X-ray crystal structure of the formyltransferase/hydrolase complex (fhcabcd) from methylorubrum extorquens in complex with methylofuran

PDB DOI: 10.2210/pdb6s6y/pdb

Classification: HYDROLASE
Organism(s): Methylobacterium Extorquens (Strain Pa1)

Deposited: 2019-07-04
Deposition Author(s): Hemmann, J.L. , Shima, S. , Vorholt, J. , Wagner, T.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.1 Å

Literature

X-ray crystal structure of the formyltransferase/hydrolase complex (fhcabcd) from methylorubrum extorquens in complex with methylofuran

Hemmann, J.L. , Shima, S. , Vorholt, J. , Wagner, T.

Primary Citation of Related Structures: 6S6Y


Proteins
Molecule Chains Sequence Length Organism Sequence
Formylmethanofuran dehydrogenase subunit A A 548 Methylobacterium Extorquens (Strain Pa1) MLTRIHGGRVVDPTAGRDAVGDVWIEDGRVVAPSERAPDQTIDATGCVVMAGGVEVHSHIAGGNVVMSRLLLPDLYVSESAPNGHPFAHAGGSGSWIGANYARMGYTTAVEPALPPSNALATHLELADIPLLDRGGLAVLGNDDHLLQLLRDGEGKQAVRDLVQQTLAHSRGLGVKCINAGGASAFKDGVLKLSLDDEIPCYGLSTRKIMSALLDAVEEIGVPHPLHVHCNNLGLPGADDSLVATLEAAEGRRIHFAHAQFYAYGVVDPENPMTGGFRSAAERINAAMEAHPNATYDVGQVVFGQTVTISLDILRQFGGRKGAKPKKWVISAGDAEGGGVVPFLYRPRGPVSSLQWAIGLELMLLSSNPERTILTTDHPNGGVFTEYPRIIHLLMDAEERAKEIATLPAIVGERSGLPKIEREYSFSEIAQLTRSGPAKLLGLTDRGHLREGAKADVAIYRDDTDRTAMFSRAKLVLKDGQPIVEDGEVVAWFSGKTLSLNVEADAGMEKRAESYLQDRFGAGLDTFAVPDAAFPENTGTFEDVACRA
Formylmethanofuran dehydrogenase subunit A E 548 Methylobacterium Extorquens (Strain Pa1) MLTRIHGGRVVDPTAGRDAVGDVWIEDGRVVAPSERAPDQTIDATGCVVMAGGVEVHSHIAGGNVVMSRLLLPDLYVSESAPNGHPFAHAGGSGSWIGANYARMGYTTAVEPALPPSNALATHLELADIPLLDRGGLAVLGNDDHLLQLLRDGEGKQAVRDLVQQTLAHSRGLGVKCINAGGASAFKDGVLKLSLDDEIPCYGLSTRKIMSALLDAVEEIGVPHPLHVHCNNLGLPGADDSLVATLEAAEGRRIHFAHAQFYAYGVVDPENPMTGGFRSAAERINAAMEAHPNATYDVGQVVFGQTVTISLDILRQFGGRKGAKPKKWVISAGDAEGGGVVPFLYRPRGPVSSLQWAIGLELMLLSSNPERTILTTDHPNGGVFTEYPRIIHLLMDAEERAKEIATLPAIVGERSGLPKIEREYSFSEIAQLTRSGPAKLLGLTDRGHLREGAKADVAIYRDDTDRTAMFSRAKLVLKDGQPIVEDGEVVAWFSGKTLSLNVEADAGMEKRAESYLQDRFGAGLDTFAVPDAAFPENTGTFEDVACRA
Formylmethanofuran dehydrogenase subunit A I 548 Methylobacterium Extorquens (Strain Pa1) MLTRIHGGRVVDPTAGRDAVGDVWIEDGRVVAPSERAPDQTIDATGCVVMAGGVEVHSHIAGGNVVMSRLLLPDLYVSESAPNGHPFAHAGGSGSWIGANYARMGYTTAVEPALPPSNALATHLELADIPLLDRGGLAVLGNDDHLLQLLRDGEGKQAVRDLVQQTLAHSRGLGVKCINAGGASAFKDGVLKLSLDDEIPCYGLSTRKIMSALLDAVEEIGVPHPLHVHCNNLGLPGADDSLVATLEAAEGRRIHFAHAQFYAYGVVDPENPMTGGFRSAAERINAAMEAHPNATYDVGQVVFGQTVTISLDILRQFGGRKGAKPKKWVISAGDAEGGGVVPFLYRPRGPVSSLQWAIGLELMLLSSNPERTILTTDHPNGGVFTEYPRIIHLLMDAEERAKEIATLPAIVGERSGLPKIEREYSFSEIAQLTRSGPAKLLGLTDRGHLREGAKADVAIYRDDTDRTAMFSRAKLVLKDGQPIVEDGEVVAWFSGKTLSLNVEADAGMEKRAESYLQDRFGAGLDTFAVPDAAFPENTGTFEDVACRA
Formylmethanofuran dehydrogenase subunit A M 548 Methylobacterium Extorquens (Strain Pa1) MLTRIHGGRVVDPTAGRDAVGDVWIEDGRVVAPSERAPDQTIDATGCVVMAGGVEVHSHIAGGNVVMSRLLLPDLYVSESAPNGHPFAHAGGSGSWIGANYARMGYTTAVEPALPPSNALATHLELADIPLLDRGGLAVLGNDDHLLQLLRDGEGKQAVRDLVQQTLAHSRGLGVKCINAGGASAFKDGVLKLSLDDEIPCYGLSTRKIMSALLDAVEEIGVPHPLHVHCNNLGLPGADDSLVATLEAAEGRRIHFAHAQFYAYGVVDPENPMTGGFRSAAERINAAMEAHPNATYDVGQVVFGQTVTISLDILRQFGGRKGAKPKKWVISAGDAEGGGVVPFLYRPRGPVSSLQWAIGLELMLLSSNPERTILTTDHPNGGVFTEYPRIIHLLMDAEERAKEIATLPAIVGERSGLPKIEREYSFSEIAQLTRSGPAKLLGLTDRGHLREGAKADVAIYRDDTDRTAMFSRAKLVLKDGQPIVEDGEVVAWFSGKTLSLNVEADAGMEKRAESYLQDRFGAGLDTFAVPDAAFPENTGTFEDVACRA
Tungsten-containing formylmethanofuran dehydrogenase, subunit B B 361 Methylobacterium Extorquens (Strain Pa1) AAWVKGGAADVDAAVEAAADLLAASRVPVLAGLSAEVSALRAAYRLAETLGASLDPVSGPSVYAELGALSAGGAMSTTRAETIGRADVILIVGNRPWDGELIAEIAAAAPSRGRAAGAERALLSLGGPQNGAIRHVAYAADAGGLTISLGHLRAFAKGHLAGEAAFADLAKRLFAAQYGVIVYDPEEVGELGAEMLQGLIRDLNESTRFFALTLADPFQGRAAVQLSAWTTGQAPRVGFGRHQPEHDSWRFDSARQIAAGEADAALWLASLPAPRPAWLGSLPTIAIVGEGSQEAAGETAEVVITVGVPGQSVGGALWNDRRGVIAYAEASDPAKTPAETETAAGVLTRIRDRLIEKGVSC
Tungsten-containing formylmethanofuran dehydrogenase, subunit B F 361 Methylobacterium Extorquens (Strain Pa1) AAWVKGGAADVDAAVEAAADLLAASRVPVLAGLSAEVSALRAAYRLAETLGASLDPVSGPSVYAELGALSAGGAMSTTRAETIGRADVILIVGNRPWDGELIAEIAAAAPSRGRAAGAERALLSLGGPQNGAIRHVAYAADAGGLTISLGHLRAFAKGHLAGEAAFADLAKRLFAAQYGVIVYDPEEVGELGAEMLQGLIRDLNESTRFFALTLADPFQGRAAVQLSAWTTGQAPRVGFGRHQPEHDSWRFDSARQIAAGEADAALWLASLPAPRPAWLGSLPTIAIVGEGSQEAAGETAEVVITVGVPGQSVGGALWNDRRGVIAYAEASDPAKTPAETETAAGVLTRIRDRLIEKGVSC
Tungsten-containing formylmethanofuran dehydrogenase, subunit B J 361 Methylobacterium Extorquens (Strain Pa1) AAWVKGGAADVDAAVEAAADLLAASRVPVLAGLSAEVSALRAAYRLAETLGASLDPVSGPSVYAELGALSAGGAMSTTRAETIGRADVILIVGNRPWDGELIAEIAAAAPSRGRAAGAERALLSLGGPQNGAIRHVAYAADAGGLTISLGHLRAFAKGHLAGEAAFADLAKRLFAAQYGVIVYDPEEVGELGAEMLQGLIRDLNESTRFFALTLADPFQGRAAVQLSAWTTGQAPRVGFGRHQPEHDSWRFDSARQIAAGEADAALWLASLPAPRPAWLGSLPTIAIVGEGSQEAAGETAEVVITVGVPGQSVGGALWNDRRGVIAYAEASDPAKTPAETETAAGVLTRIRDRLIEKGVSC
Tungsten-containing formylmethanofuran dehydrogenase, subunit B N 361 Methylobacterium Extorquens (Strain Pa1) AAWVKGGAADVDAAVEAAADLLAASRVPVLAGLSAEVSALRAAYRLAETLGASLDPVSGPSVYAELGALSAGGAMSTTRAETIGRADVILIVGNRPWDGELIAEIAAAAPSRGRAAGAERALLSLGGPQNGAIRHVAYAADAGGLTISLGHLRAFAKGHLAGEAAFADLAKRLFAAQYGVIVYDPEEVGELGAEMLQGLIRDLNESTRFFALTLADPFQGRAAVQLSAWTTGQAPRVGFGRHQPEHDSWRFDSARQIAAGEADAALWLASLPAPRPAWLGSLPTIAIVGEGSQEAAGETAEVVITVGVPGQSVGGALWNDRRGVIAYAEASDPAKTPAETETAAGVLTRIRDRLIEKGVSC
Formylmethanofuran dehydrogenase subunit C C 276 Methylobacterium Extorquens (Strain Pa1) STLRLRGDLPERVDLLNITPLALSGLSETEAGKLAIGTSRRGLTLGDVFEIRLDGSDSLVIEGGSARLDRVGAALSQGSIRVEGDVGQRLGEGMAAGTLTVTGSAGPYAGTGATGGTITIEGDAGDHAGGAVYAAKAGLDGATLVIKGAAGDHLGDRMRRGMILAGSAGAFAASRMIAGTIVVSGALGDHPGYGMRRGTLIAGSHGTLLPTFVETGTPDLVFVRLLAQSLKHLGAAQANLLSGTLRRYSGDLATLGKGELFVPAHGSAWSHPQFEK
Formylmethanofuran dehydrogenase subunit C G 276 Methylobacterium Extorquens (Strain Pa1) STLRLRGDLPERVDLLNITPLALSGLSETEAGKLAIGTSRRGLTLGDVFEIRLDGSDSLVIEGGSARLDRVGAALSQGSIRVEGDVGQRLGEGMAAGTLTVTGSAGPYAGTGATGGTITIEGDAGDHAGGAVYAAKAGLDGATLVIKGAAGDHLGDRMRRGMILAGSAGAFAASRMIAGTIVVSGALGDHPGYGMRRGTLIAGSHGTLLPTFVETGTPDLVFVRLLAQSLKHLGAAQANLLSGTLRRYSGDLATLGKGELFVPAHGSAWSHPQFEK
Formylmethanofuran dehydrogenase subunit C K 276 Methylobacterium Extorquens (Strain Pa1) STLRLRGDLPERVDLLNITPLALSGLSETEAGKLAIGTSRRGLTLGDVFEIRLDGSDSLVIEGGSARLDRVGAALSQGSIRVEGDVGQRLGEGMAAGTLTVTGSAGPYAGTGATGGTITIEGDAGDHAGGAVYAAKAGLDGATLVIKGAAGDHLGDRMRRGMILAGSAGAFAASRMIAGTIVVSGALGDHPGYGMRRGTLIAGSHGTLLPTFVETGTPDLVFVRLLAQSLKHLGAAQANLLSGTLRRYSGDLATLGKGELFVPAHGSAWSHPQFEK
Formylmethanofuran dehydrogenase subunit C O 276 Methylobacterium Extorquens (Strain Pa1) STLRLRGDLPERVDLLNITPLALSGLSETEAGKLAIGTSRRGLTLGDVFEIRLDGSDSLVIEGGSARLDRVGAALSQGSIRVEGDVGQRLGEGMAAGTLTVTGSAGPYAGTGATGGTITIEGDAGDHAGGAVYAAKAGLDGATLVIKGAAGDHLGDRMRRGMILAGSAGAFAASRMIAGTIVVSGALGDHPGYGMRRGTLIAGSHGTLLPTFVETGTPDLVFVRLLAQSLKHLGAAQANLLSGTLRRYSGDLATLGKGELFVPAHGSAWSHPQFEK
Formylmethanofuran--tetrahydromethanopterin formyltransferase D 310 Methylobacterium Extorquens (Strain Pa1) SDFTLNGIKVEDTFAEAFDVAGTAIIVTNDTPKWAMIAATVMTGFATSVIGCGAEAGIDAELSPDETPDGRPGVRILLFGFEPNGLKDQLLKRVGQCILTCPGTACFAGVEGPTKIKLGGAIRYFGDGFAVAKRLPDHEGKMRRYWRIPVMDGEFLCEDSVRAVDGAVGGGNLLFLGRKHADTLIVAEIAVEAAKAIPGAILPFPGGIVRSGSKVGGRTKGMMASTNDAYCPTLKGRAGSALPPECGVVLEIVIDALTSAAVAESMRAALHAATEIGAQHGLVAVTAGNYGGNLGRHHYHLRDLLEKPAA
Formylmethanofuran--tetrahydromethanopterin formyltransferase H 310 Methylobacterium Extorquens (Strain Pa1) SDFTLNGIKVEDTFAEAFDVAGTAIIVTNDTPKWAMIAATVMTGFATSVIGCGAEAGIDAELSPDETPDGRPGVRILLFGFEPNGLKDQLLKRVGQCILTCPGTACFAGVEGPTKIKLGGAIRYFGDGFAVAKRLPDHEGKMRRYWRIPVMDGEFLCEDSVRAVDGAVGGGNLLFLGRKHADTLIVAEIAVEAAKAIPGAILPFPGGIVRSGSKVGGRTKGMMASTNDAYCPTLKGRAGSALPPECGVVLEIVIDALTSAAVAESMRAALHAATEIGAQHGLVAVTAGNYGGNLGRHHYHLRDLLEKPAA
Formylmethanofuran--tetrahydromethanopterin formyltransferase L 310 Methylobacterium Extorquens (Strain Pa1) SDFTLNGIKVEDTFAEAFDVAGTAIIVTNDTPKWAMIAATVMTGFATSVIGCGAEAGIDAELSPDETPDGRPGVRILLFGFEPNGLKDQLLKRVGQCILTCPGTACFAGVEGPTKIKLGGAIRYFGDGFAVAKRLPDHEGKMRRYWRIPVMDGEFLCEDSVRAVDGAVGGGNLLFLGRKHADTLIVAEIAVEAAKAIPGAILPFPGGIVRSGSKVGGRTKGMMASTNDAYCPTLKGRAGSALPPECGVVLEIVIDALTSAAVAESMRAALHAATEIGAQHGLVAVTAGNYGGNLGRHHYHLRDLLEKPAA
Formylmethanofuran--tetrahydromethanopterin formyltransferase P 310 Methylobacterium Extorquens (Strain Pa1) SDFTLNGIKVEDTFAEAFDVAGTAIIVTNDTPKWAMIAATVMTGFATSVIGCGAEAGIDAELSPDETPDGRPGVRILLFGFEPNGLKDQLLKRVGQCILTCPGTACFAGVEGPTKIKLGGAIRYFGDGFAVAKRLPDHEGKMRRYWRIPVMDGEFLCEDSVRAVDGAVGGGNLLFLGRKHADTLIVAEIAVEAAKAIPGAILPFPGGIVRSGSKVGGRTKGMMASTNDAYCPTLKGRAGSALPPECGVVLEIVIDALTSAAVAESMRAALHAATEIGAQHGLVAVTAGNYGGNLGRHHYHLRDLLEKPAA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-07-04
Deposition Author(s): Hemmann, J.L. , Shima, S. , Vorholt, J. , Wagner, T.