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FASTA Sequence PDB Format mmCIF Format
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6S48

Avaii restriction endonuclease in complex with partially cleaved dsdna

PDB DOI: 10.2210/pdb6s48/pdb

Classification: HYDROLASE
Organism(s): Nostoc Sp. Pcc 7120 = Fachb-418 , Synthetic Construct

Deposited: 2019-06-26
Deposition Author(s): Bochtler, M. , Czapinska, H. , Kisiala, M. , Korza, H. , Kowalska, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.9 Å

6s48
Literature

Avaii restriction endonuclease in complex with partially cleaved dsdna

Bochtler, M. , Czapinska, H. , Kisiala, M. , Korza, H. , Kowalska, M.

Primary Citation of Related Structures: 6S48


Proteins
Molecule Chains Sequence Length Organism Sequence
Type II site-specific deoxyribonuclease A 238 Nostoc Sp. Pcc 7120 = Fachb-418 , Synthetic Construct MGSKFIQNAAEIAKKAMDSVDPSLSEKFTIVIRFLTDNPDAASALKGKERSIVGTEEYIIASATNFKKGRDPRTPLPPSTIPDEMVSVILNKYFEVPSEELEKAEEWHRLSMGAENIVGDLLERYIAEVIEPHGWIWCSGSMVRAVDFIYCDSENVWQSLQVKNRDNTENSSSAAIRHGTPIKKWFRTFSKKRGDNWDKFPSLEGKENLSEKGFKLYVEKYLSALRAIKALEHHHHHH
Type II site-specific deoxyribonuclease B 238 Nostoc Sp. Pcc 7120 = Fachb-418 , Synthetic Construct MGSKFIQNAAEIAKKAMDSVDPSLSEKFTIVIRFLTDNPDAASALKGKERSIVGTEEYIIASATNFKKGRDPRTPLPPSTIPDEMVSVILNKYFEVPSEELEKAEEWHRLSMGAENIVGDLLERYIAEVIEPHGWIWCSGSMVRAVDFIYCDSENVWQSLQVKNRDNTENSSSAAIRHGTPIKKWFRTFSKKRGDNWDKFPSLEGKENLSEKGFKLYVEKYLSALRAIKALEHHHHHH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*AP*TP*GP*GP*TP*CP*CP*TP*AP*C)-3') c 11 NA GATGGTCCTAC
DNA (5'-D(*GP*TP*AP*G)-3') d 4 NA GTAG
DNA (5'-D(*GP*TP*AP*G)-3') h 4 NA GTAG
DNA (5'-D(P*GP*AP*CP*CP*AP*TP*C)-3') e 7 NA GACCATC
DNA (5'-D(P*GP*AP*CP*CP*AP*TP*C)-3') i 7 NA GACCATC
DNA (5'-D(*GP*AP*TP*G)-3') f 4 NA GATG
DNA (5'-D(P*GP*TP*CP*CP*TP*AP*C)-3') g 7 NA GTCCTAC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-06-26
Deposition Author(s): Bochtler, M. , Czapinska, H. , Kisiala, M. , Korza, H. , Kowalska, M.