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6S0R

The crystal structure of kanamycin b dioxygenase (kanj) from streptomyces kanamyceticus complex with nickel, sulfate and chloride

PDB DOI: 10.2210/pdb6s0r/pdb

Classification: ANTIBIOTIC
Organism(s): Streptomyces Kanamyceticus

Deposited: 2019-06-18
Deposition Author(s): Borowski, T. , Cymborowski, M.T. , Minor, W. , Mrugala, B. , Niedzialkowska, E. , Porebski, P.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.5 Å

6s0r
Literature

The crystal structure of kanamycin b dioxygenase (kanj) from streptomyces kanamyceticus complex with nickel, sulfate and chloride

Borowski, T. , Cymborowski, M.T. , Minor, W. , Mrugala, B. , Niedzialkowska, E. , Porebski, P.J.

Primary Citation of Related Structures: 6S0R


Proteins
Molecule Chains Sequence Length Organism Sequence
Kanamycin B dioxygenase A 288 Streptomyces Kanamyceticus SNAMALAAPPGELTLALTPDDKTLDPASLDRALAILAEHGILVLTGMLRTRLTDQLRTAMLDDLPEVLRQQDVPTNFVPGHVQQDPPVRESLLFPDVLLNPVVYQITHAVLGADARNAVYSGNMNLPGSHEQPVHLDEPHLWPGISHPPYCLCVDVPLIDFTLENGSTEYWPGSHVLNPDECYDERGCVLPAELERRRAVAPPVRFPIPVGSVVIRDGRLWHRGVPNLSAAPRPLLAMTHYTEWFDMPPIQLPDTVKSWVDGSDRHTHAHFVAGDVDHLTGDHPFAVR
Kanamycin B dioxygenase B 288 Streptomyces Kanamyceticus SNAMALAAPPGELTLALTPDDKTLDPASLDRALAILAEHGILVLTGMLRTRLTDQLRTAMLDDLPEVLRQQDVPTNFVPGHVQQDPPVRESLLFPDVLLNPVVYQITHAVLGADARNAVYSGNMNLPGSHEQPVHLDEPHLWPGISHPPYCLCVDVPLIDFTLENGSTEYWPGSHVLNPDECYDERGCVLPAELERRRAVAPPVRFPIPVGSVVIRDGRLWHRGVPNLSAAPRPLLAMTHYTEWFDMPPIQLPDTVKSWVDGSDRHTHAHFVAGDVDHLTGDHPFAVR
Kanamycin B dioxygenase C 288 Streptomyces Kanamyceticus SNAMALAAPPGELTLALTPDDKTLDPASLDRALAILAEHGILVLTGMLRTRLTDQLRTAMLDDLPEVLRQQDVPTNFVPGHVQQDPPVRESLLFPDVLLNPVVYQITHAVLGADARNAVYSGNMNLPGSHEQPVHLDEPHLWPGISHPPYCLCVDVPLIDFTLENGSTEYWPGSHVLNPDECYDERGCVLPAELERRRAVAPPVRFPIPVGSVVIRDGRLWHRGVPNLSAAPRPLLAMTHYTEWFDMPPIQLPDTVKSWVDGSDRHTHAHFVAGDVDHLTGDHPFAVR
Kanamycin B dioxygenase D 288 Streptomyces Kanamyceticus SNAMALAAPPGELTLALTPDDKTLDPASLDRALAILAEHGILVLTGMLRTRLTDQLRTAMLDDLPEVLRQQDVPTNFVPGHVQQDPPVRESLLFPDVLLNPVVYQITHAVLGADARNAVYSGNMNLPGSHEQPVHLDEPHLWPGISHPPYCLCVDVPLIDFTLENGSTEYWPGSHVLNPDECYDERGCVLPAELERRRAVAPPVRFPIPVGSVVIRDGRLWHRGVPNLSAAPRPLLAMTHYTEWFDMPPIQLPDTVKSWVDGSDRHTHAHFVAGDVDHLTGDHPFAVR
Kanamycin B dioxygenase E 288 Streptomyces Kanamyceticus SNAMALAAPPGELTLALTPDDKTLDPASLDRALAILAEHGILVLTGMLRTRLTDQLRTAMLDDLPEVLRQQDVPTNFVPGHVQQDPPVRESLLFPDVLLNPVVYQITHAVLGADARNAVYSGNMNLPGSHEQPVHLDEPHLWPGISHPPYCLCVDVPLIDFTLENGSTEYWPGSHVLNPDECYDERGCVLPAELERRRAVAPPVRFPIPVGSVVIRDGRLWHRGVPNLSAAPRPLLAMTHYTEWFDMPPIQLPDTVKSWVDGSDRHTHAHFVAGDVDHLTGDHPFAVR
Kanamycin B dioxygenase F 288 Streptomyces Kanamyceticus SNAMALAAPPGELTLALTPDDKTLDPASLDRALAILAEHGILVLTGMLRTRLTDQLRTAMLDDLPEVLRQQDVPTNFVPGHVQQDPPVRESLLFPDVLLNPVVYQITHAVLGADARNAVYSGNMNLPGSHEQPVHLDEPHLWPGISHPPYCLCVDVPLIDFTLENGSTEYWPGSHVLNPDECYDERGCVLPAELERRRAVAPPVRFPIPVGSVVIRDGRLWHRGVPNLSAAPRPLLAMTHYTEWFDMPPIQLPDTVKSWVDGSDRHTHAHFVAGDVDHLTGDHPFAVR
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-06-18
Deposition Author(s): Borowski, T. , Cymborowski, M.T. , Minor, W. , Mrugala, B. , Niedzialkowska, E. , Porebski, P.J.