6RQF
3.6 angstrom cryo-em structure of the dimeric cytochrome b6f complex from spinacia oleracea with natively bound thylakoid lipids and plastoquinone molecules
PDB DOI: 10.2210/pdb6rqf/pdb
Classification: PHOTOSYNTHESIS Organism(s): Spinacia Oleracea
Deposited: 2019-05-15 Deposition Author(s): Farmer, D. , Hitchcock, A. , Hunter, C.N. , Johnson, M.P. , Malone, L.A. , Mayneord, G.E. , Qian, P. , Ranson, N. , Swainsbury, D.J.K. , Thompson, R.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.58 Å
3.6 angstrom cryo-em structure of the dimeric cytochrome b6f complex from spinacia oleracea with natively bound thylakoid lipids and plastoquinone molecules
Farmer, D. , Hitchcock, A. , Hunter, C.N. , Johnson, M.P. , Malone, L.A. , Mayneord, G.E. , Qian, P. , Ranson, N. , Swainsbury, D.J.K. , Thompson, R.
Primary Citation of Related Structures: 6RQF
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Cytochrome b6 | I | 215 | Spinacia Oleracea | MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTDAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLGVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL |
| Cytochrome b6 | A | 215 | Spinacia Oleracea | MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTDAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLGVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL |
| Cytochrome b6-f complex subunit 4 | J | 160 | Spinacia Oleracea | MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENVNKFQNPFRRPVATTVFLVGTVVALWLGIGATLPIDKSLTLGLF |
| Cytochrome b6-f complex subunit 4 | B | 160 | Spinacia Oleracea | MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENVNKFQNPFRRPVATTVFLVGTVVALWLGIGATLPIDKSLTLGLF |
| Cytochrome f | K | 285 | Spinacia Oleracea | YPIFAQQGYENPREATGRIVCANCHLANKPVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPPDRISPEMKEKMGNLSFQSYRPNKQNILVIGPVPGQKYSEITFPILAPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLQDPLRIQGLLFFFASVILAQIFLVLKKKQFEKVQLSEMNF |
| Cytochrome f | C | 285 | Spinacia Oleracea | YPIFAQQGYENPREATGRIVCANCHLANKPVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPPDRISPEMKEKMGNLSFQSYRPNKQNILVIGPVPGQKYSEITFPILAPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNSTATGIVKKIVRKEKGGYEINIADASDGREVVDIIPRGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEVVLQDPLRIQGLLFFFASVILAQIFLVLKKKQFEKVQLSEMNF |
| Cytochrome b6-f complex iron-sulfur subunit, chloroplastic | L | 179 | Spinacia Oleracea | ATSIPADNVPDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWLKTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWSA |
| Cytochrome b6-f complex iron-sulfur subunit, chloroplastic | D | 179 | Spinacia Oleracea | ATSIPADNVPDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWLKTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWSA |
| Cytochrome b6-f complex subunit 6 | M | 31 | Spinacia Oleracea | MFTLTSYFGFLLAALTITSALFIGLNKIRLI |
| Cytochrome b6-f complex subunit 6 | E | 31 | Spinacia Oleracea | MFTLTSYFGFLLAALTITSALFIGLNKIRLI |
| Cytochrome b6-f complex subunit 7 | N | 36 | Spinacia Oleracea | NAAAEIFRIAAVMNGLTLVGVAIGFVLLRIEATVEE |
| Cytochrome b6-f complex subunit 7 | F | 36 | Spinacia Oleracea | NAAAEIFRIAAVMNGLTLVGVAIGFVLLRIEATVEE |
| Cytochrome b6-f complex subunit 5 | O | 37 | Spinacia Oleracea | MIEVFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL |
| Cytochrome b6-f complex subunit 5 | G | 37 | Spinacia Oleracea | MIEVFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL |
| Cytochrome b6-f complex subunit 8 | P | 29 | Spinacia Oleracea | MDIVSLAWAALMVVFTFSLSLVVWGRSGL |
| Cytochrome b6-f complex subunit 8 | H | 29 | Spinacia Oleracea | MDIVSLAWAALMVVFTFSLSLVVWGRSGL |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2019-05-15 Deposition Author(s): Farmer, D. , Hitchcock, A. , Hunter, C.N. , Johnson, M.P. , Malone, L.A. , Mayneord, G.E. , Qian, P. , Ranson, N. , Swainsbury, D.J.K. , Thompson, R.