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FASTA Sequence PDB Format mmCIF Format
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6RGL

Cryo-em structure of the anti-feeding prophage (afp) baseplate in contracted state

PDB DOI: 10.2210/pdb6rgl/pdb

Classification: VIRUS LIKE PARTICLE
Organism(s): Serratia Entomophila

Deposited: 2019-04-16
Deposition Author(s): Desfosses, A.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 5.4 Å

6rgl
Literature

Cryo-em structure of the anti-feeding prophage (afp) baseplate in contracted state

Desfosses, A.

Primary Citation of Related Structures: 6RGL


Proteins
Molecule Chains Sequence Length Organism Sequence
Afp2 B 354 Serratia Entomophila MTVTTTYPGVYLSEDAVSSFSVNSAATAVPLFAYDSENTNTINKPIQVFRNWAEFTVEYPTPLEDAFYTSLSLWFMHGGGKCYLVNEANIADAVAQYDDITLIVAAGTDTTTYTAFTTVVGQGYRIFGLFDGPKEKIAGTAKPDEVMEEYPTSPFGAVFYPWGTLASGAAVPPSAIAAASITQTDRTRGVWKAPANQAVNGVTPAFAVSDDFQGKYNQGKALNMIRTFSGQGTVVWGARTLEDSDNWRYIPVRRLFNAVERDIQKSLNKLVFEPNSQPTWQRVKAAVDSYLHSLWQQGALAGNTPADAWFVQVGKDLTMTQEEINQGKMIIKIGLAAVRPAEFIILQFSQDIAQ
Afp2 A 354 Serratia Entomophila MTVTTTYPGVYLSEDAVSSFSVNSAATAVPLFAYDSENTNTINKPIQVFRNWAEFTVEYPTPLEDAFYTSLSLWFMHGGGKCYLVNEANIADAVAQYDDITLIVAAGTDTTTYTAFTTVVGQGYRIFGLFDGPKEKIAGTAKPDEVMEEYPTSPFGAVFYPWGTLASGAAVPPSAIAAASITQTDRTRGVWKAPANQAVNGVTPAFAVSDDFQGKYNQGKALNMIRTFSGQGTVVWGARTLEDSDNWRYIPVRRLFNAVERDIQKSLNKLVFEPNSQPTWQRVKAAVDSYLHSLWQQGALAGNTPADAWFVQVGKDLTMTQEEINQGKMIIKIGLAAVRPAEFIILQFSQDIAQ
Afp3 C 451 Serratia Entomophila MATVTSVPGVYIEEDASPAMSVSASATAVPLFVARFTPLKPELAGVITRIGSWLDYTILFDSNVPSSARVTVSSTAVEPSPEFDALETASSKATTTYTYQIDDTEVVDPTASVALRLYFQNGGGPCYLYPLEKADDNGPLAALPDLIDEVGEITLLASPDPDETYRTAVYGALAASLDQHKGYFLLADSVNGDAPSAVGGSAQVAVYYPNVEVPHTRKLDDAEVAIDGYLDDEGKAVTTLAALRVVNTEFAGEIAQSLSGDLSAPLSLPPSALIAGVYGKTDGERGVWKAPANVVLNGVSDVSVRVTNEQQAELNPKGINVIRHFSDRGLVVWGSRTQKDDDDWRYIPVRRLFDAAERDIKKALQPMVFEPNSQLTWKRVQTAIDNYLYRLWQQGALAGNKAEEAYFVRVGKGITMTQDEINQGKMIIQVGMAAVRPAEFIILKFTQDMSQ
Afp4 D 417 Serratia Entomophila MTMVLPGVSYNETLLTQASNDDPVTMPLFIGYTPPDTAIPVTVMQPVSVGSLTQANSLFGQRGTLAYSLRHFFENGGLQCYVLPLGPGKGEPAARLQELIAALQTPQMLETLLADDKTGLVLVPELSELNEVSSTSLSAEGVDAAEVDADALWYQGWQVLLTLCRQAPQRFALLELPEDPASAVTLTQQSFSADQCQRGAAWWPRLETSYQDESSAPVVLSPLPAVAAAIQRSAHDNGVWKAPANIALAKTRRPTQSILTSQALLDNQGVSCNLIRSFVGKGVRLWGCRTLLNEENTAWRYIQIRLLVSSVEHYLSKLARAYLFEPNTAPTWMKLKGQVWTWLRQQWLAGAFFGTVEDEAFSLSIGLDETMTEDDIRHGKMILQVRLALLAPAEFIAISLTLDLRDGTASAQTGGQS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-04-16
Deposition Author(s): Desfosses, A.