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FASTA Sequence PDB Format mmCIF Format
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6RDA

Cryoem structure of polytomella f-atp synthase, primary rotary state 1, monomer-masked refinement

PDB DOI: 10.2210/pdb6rda/pdb

Classification: PROTON TRANSPORT
Organism(s): Alcyonium

Deposited: 2019-04-12
Deposition Author(s): Klusch, N. , Kuhlbrandt, W. , Murphy, B.J. , Yildiz, O.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.04 Å

6rda
Literature

Cryoem structure of polytomella f-atp synthase, primary rotary state 1, monomer-masked refinement

Klusch, N. , Kuhlbrandt, W. , Murphy, B.J. , Yildiz, O.

Primary Citation of Related Structures: 6RDA


Proteins
Molecule Chains Sequence Length Organism Sequence
ASA-10: Polytomella F-ATP synthase associated subunit 10 0 82 Alcyonium MSYSAYFAKAGFQFPAGLSALVAGIVALNVCTGRPTKGTKEISNAEYNATPIGYLQSPDQHPTAFPKVPGMKDVHGSPHHHH
ASA-9: Polytomella F-ATP synthase associated subunit 9 9 97 Alcyonium MAVTSFLGKAFEKYFYDFSAYEQFGLNRFLSSKGQYVALRHVGFVMVGVNVLLAANFPFNPPFPTIGMCPAGWEGTWVCQADKAKALEMYKEWKKSN
Mitochondrial ATP synthase subunit 6 M 327 Alcyonium MSVLSSVSMGSRIGSSLLGRSSAYLAQCGFSTRSNLNGSIDTSSSVFQALSSDNENKPAASPLNVKLPGMSCSSILLPKTSRIAVPFGNQTMAMSSVRDVKTGSLPTNFLTGVYRFWRSQNPAEKPHDPVNDRLLPAVVDASDKRASIGTWATTFFCTIISCNLLGLMPFNEAPTSGLGFATGLGVSVWATATILGLSKTGFKFPGHFIPGGTPWPMAFIFVPLETISYTFRAVSLGVRLWVNMLAGHTLLHILTGMALALPFSLGFFSMVPATFGVCCLLSALVGLEYLVAVLQSGVFSILSTVYVGEFNHDKFIGPAAKIVKKIH
Mitochondrial ATP synthase subunit OSCP P 229 Alcyonium MLARVASVALRRAEGKIMPQMVRALSVSAASAAQAELKLPTAPLQLSGTSAQIATLLWQVAAKENQLDKVQDELYQFIELFKQHSELRRLATDPFVPTLVRTKIISSVLKDSGASEITKKLFEALADEGALSALLEVTVNYEELMLAHKKEVYCTVITAEPLDKLERVELTKKAEKFVDAGFKLVMQEKIDKKLLGGFVIEFSDRRVDMSTAKKVEEFNNFVNKLVLSI
ATP synthase subunit alpha T 562 Alcyonium MRSPAAFVARSGLFKASLGQSNWAQKAEQMMASVTRTFAADAKALDELRKPKFSSKYLIQHVSQKLIPAVKEWEKSYQPPVIHLGRVLSVGDGIARVYGLKSVQAGELVCFDSGVKGMALNLQADHVGVVVFGNDSVIHQGDLVYRTGQIVNVPIGPGTLGRVTDGLGQPIDGKGPLTNVRSSLVEVKAPGIIARQSVREPLFTGVKAVDALVPIGRGQRELIIGDRQTGKTAVAIDAIIHQKNCNEQVPKAQRVYCVYVAVGQKRSTVAQLVKLFTQTGAMRYTIMVSATASDAAPLQFLAPYSGCAMAEYFRDTGKHGLIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKLSKELGGGSLTAFPVIETQAGDVSAYIATNVISITDGQIFLETELFYKGIRPALNVGLSVSRVGSAAQFPGMKQVAGTLKLELAQYREVAAFAQFGSDLDAATQYVLERGARLTEMLKQKQFAPIPIERQTVAVYAATKGFLDKVRVQDIVAAEEAVISQVNPAVFKILKANGKITPALDAHLKAELRKVKLPGA
ATP synthase associated protein ASA1 1 618 Alcyonium MMRAAQKAKQELPATVLTQTRSYLAPLRSDFTEEITAPKVASASNLVNEWNNKKQATENLMKLLQAYKDIGDAKSEPLLKNHNPRTFEDRDYPVPDFRTQNLKAGDVPKFFDTVISTRASAAIASKDKFWAGRKTEAEAASAKASAAFPRVAVPEWKKGKTVSIENLNTVTDKYAAALVPKRKLALPVLPEGVKKAVEDFAASVGQAKNASEVSELLAKSLAEKAVVTEGGKVVEGFSYVSKAVAAKVIATRRAEVHERLLKLWAKRLLVSPELAIVPLNEFDAQLASKFEGISPKYQELLSAVAQGNKTFAQRLNSSPAFSSFLLKREKAESEVPPSELELEAAQKAAELEDPEVALRTLLGPQMEALGASDLLLSEQIRVITEHRYTPDRLQYKEGMKLADKIAAQEAALKEELKVIYGDNVDVKHFQASPRTPVQQLFDSLKNAAANKERAAKEAAAAASPYLAYAVTKKQEVQADPSNIPFDEVLYPQLSEELLELELSDIREDEIALEKAEEEELWLLTLTQQFKHIQKHFGIDLPHSVVAHMDPLLIKKIDWETTNALEDFDITLDDMGAEDAKEQWGAENLSHHFLPLIRYRRDLARKNGDRYGPDLVNGN
ASA-2: Polytomella F-ATP synthase associated subunit 2 2 441 Alcyonium ENDVPAILKEIDSLVSREAVSAKEVSDAAVALTYLQVKANRRLWGKVLEKAGAAQDYDAASLTNLLWAINTGGVEHFKTVAELAGPAVSLLPSLSPVQLSIVVEALGGAGVKNYELYNKASAVVVSKIGEFKPAEIARVLYGVAFGGVNDVALAKAAGKVFASTEVDSRTAAQALYALAKLGRADKATVDALLKSFKKGTESASDAAAASFALGSLSFKAEKAIVDALKASAGDLAPAQAVEAAYGLALSGATDAEAFKALFGVVAPAIEKAPDALEVSSLAQLHVASTISGAKLPAAVGSFVAKAFGLAADAARLKRSSAESALVADVAAATAVAFGAQYRPEVASAVASYVKTAPDGSVLDIAITKGDAKVLVQAVPSSLLTSTTPAKPLGHVAAYSKVREAQGYAVAVVPANEFEALPDQKAKAQYVLAAIKKVAPSF
Mitochondrial F1F0 ATP synthase associated 32 kDa protein 3 325 Alcyonium MRQASRLALSIRQAGNVEAASAVPAMTRQFSAPGSHEHHETPLSKVMPTVVSIPRKVACLALGATKKVVCGLASSGPSQNLVSTFANKVIVEENLVNVAEIDVPFWSYWLSSAGFTSKDAFVKFAEAVKPKVAALSTSDITNLTVAFKRANYYDKDLFTGIEANVSANFTKFETEQLLQIVATFDAFNHSSVAFLDDVADSITYCNHYLAPVRAGADELATLLTYYAKNGHERADLLATVARGFSEVSLGKLSAAQRKDTVLSALKAFQTFGFYPESIEAVIGAALVSPAEYSAEELKEVEAVKVAAENALGGEFVLIQEGAHGH
Mitochondrial ATP synthase associated protein ASA4 4 294 Alcyonium ATEPAVSKKEVLYFLSSKDAESSTAVKSYLKSLYAGAQVEATETDASELIAQLEKKYLSAQVVEPGVHNIALPLGESGSAPVKRYAAELFNLGAQAGFECPFIEVSKKFGQETATSETVKDVLNKTKSYVSADYNAALNEVLSSVEAEINGPVLFDGKTEGFKKFAAKAKAVAVSRGLPADTILAYCAGSANEDAADKVSKEFFTWFESAYTADAAAEVKAIEAEAASILDRHLAKPVAQIRKEQASAYASLLKRAETAKGAKWAEKYLEDVKAVQWFDASVAEAPASGPKVAA
Mitochondrial F1F0 ATP synthase associated 14 kDa protein 5 123 Alcyonium MKLLPESLQQEAATAAVVASWVLWHLDTQLLPTIMREHKLHACWAAAAKRYNEKLFKLNPSYDRVLSLPAVSKNQVLENVFHTAPKAPVEHLEKMVSANSKVYDALNLQSKRVLIWQVKPALF
Mitochondrial ATP synthase subunit ASA6 6 151 Alcyonium MMLRTLTRSSAVAGQAVRLFKTSAAAAEGNSVAGIIKSVNETSGANLLSSLKTIKAQAAPIYPAAASSTGYSTQAKIALFGALSWILYRADGQSKAHEWIVDLNLNVLQAAWLISFSSLIPFRAVYFAFRGMAPATASTLNGLKTFSSISL
Mitochondrial ATP synthase associated protein ASA7 7 190 Alcyonium MSSVRAGVEAGRRDLTTFTFSGLQDAPVAALSGSIKLNVAAKAGKAEVTVAAGAAKAATQVSAAALRKLSGSKISLAEVARISVLHSSIQNYLLSLSNERYQLLSQWPDFTTMYGKDFYYRAHPEDLKKFYDAADEYYKLYETVTEFDSLSALASQVVPNYAARRRSTVHPAIGSTVADGAFTNFLLSKQ
Mitochondrial ATP synthase subunit ASA8 8 89 Alcyonium MVLGEVYLKDILRTPPTGAIPANVPHPFQTSFYTYATKKLIPRHWYLLGGFTFTITLYGILDGLRDSGKKKAYDEAIHAGKTPYTAGGH
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-04-12
Deposition Author(s): Klusch, N. , Kuhlbrandt, W. , Murphy, B.J. , Yildiz, O.