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6R1T

Structure of lsd2/npac-linker/nucleosome core particle complex: class 1, free nuclesome

PDB DOI: 10.2210/pdb6r1t/pdb

Classification: GENE REGULATION
Organism(s): Synthetic Construct , Xenopus Laevis

Deposited: 2019-03-15
Deposition Author(s): Chittori, S. , Marabelli, C. , Mattevi, A. , Pilotto, S. , Subramaniam, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.02 Å

6r1t
Literature

Structure of lsd2/npac-linker/nucleosome core particle complex: class 1, free nuclesome

Chittori, S. , Marabelli, C. , Mattevi, A. , Pilotto, S. , Subramaniam, S.

Primary Citation of Related Structures: 6R1T


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3 A 99 Synthetic Construct , Xenopus Laevis KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H3 E 99 Synthetic Construct , Xenopus Laevis KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
HISTONE H2A B 87 Synthetic Construct , Xenopus Laevis KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
HISTONE H2A F 87 Synthetic Construct , Xenopus Laevis KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A C 111 Synthetic Construct , Xenopus Laevis TRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKT
Histone H2A G 111 Synthetic Construct , Xenopus Laevis TRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKT
Histone H2B D 96 Synthetic Construct , Xenopus Laevis RRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA
Histone H2B H 96 Synthetic Construct , Xenopus Laevis RRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (147-MER) i 147 NA ATCGGATGTATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTCGAT
DNA (147-MER) j 147 NA ATCGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCCGAT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-03-15
Deposition Author(s): Chittori, S. , Marabelli, C. , Mattevi, A. , Pilotto, S. , Subramaniam, S.