Crystal structure of deah-box atpase prp22-s837a with bound ssrna
PDB DOI: 10.2210/pdb6qic/pdb
Classification: HYDROLASE Organism(s): Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) , Synthetic Construct
Deposited: 2019-01-18 Deposition Author(s): Enders, M. , Ficner, R. , Hamann, F.
Crystal structure of deah-box atpase prp22-s837a with bound ssrna
Enders, M. , Ficner, R. , Hamann, F.
Primary Citation of Related Structures: 6QIC
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Putative pre-mRNA splicing factor | A | 677 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) , Synthetic Construct | TNMSIKEQRESLPVFQFRDQIIQAVKDNQILIVVGETGSGKTTQVTQYLAEAGFTKYGMIGCTQPRRVAAVSVAKRVAEEVGCQLGQEVGYTIRFEDVTSPATKIKYMTDGMLQREILMDPDLKRYSVIMLDEAHERTIATDVLFALLKKTVKRRPDLKVIVTSATLDAEKFSEYFNSCPIFTIPGRTFPVEILYSREPEPDYLEAALTTVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKALGPSVPELIILPIYSALPSEMQSRIFEPAPPGSRKVVIATNIAETAITIDYIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTIPDIQRQNLANTILLLKAMGINDLLRFDFMDPPPVNTMLTALEELYALGALDDEGLLTRLGRKMADFPMEPSLSKVLIASVDKGCSDEMVTIVSMLNLQQIFYRPKDKQQQADQKKAKFHDPTGDHLTLLNVYNAWKNSGYSNAWCFENYIQARAMRRARDVRQQIVKIMERHRHPIISCGRDTDKIRQALCAGFFRNTARKDPQEGYKTLTEGTPVYLHPSSALFGKQAEWVLYHELVLTTKEYMHFTTAIEPKWLVEAAPTFFKLAPTDRLSKRKKAERIQPLYNKYEGEDGWRLSAQRRAARPGGGGGTWG |
Putative pre-mRNA splicing factor | B | 677 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) , Synthetic Construct | TNMSIKEQRESLPVFQFRDQIIQAVKDNQILIVVGETGSGKTTQVTQYLAEAGFTKYGMIGCTQPRRVAAVSVAKRVAEEVGCQLGQEVGYTIRFEDVTSPATKIKYMTDGMLQREILMDPDLKRYSVIMLDEAHERTIATDVLFALLKKTVKRRPDLKVIVTSATLDAEKFSEYFNSCPIFTIPGRTFPVEILYSREPEPDYLEAALTTVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKALGPSVPELIILPIYSALPSEMQSRIFEPAPPGSRKVVIATNIAETAITIDYIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTIPDIQRQNLANTILLLKAMGINDLLRFDFMDPPPVNTMLTALEELYALGALDDEGLLTRLGRKMADFPMEPSLSKVLIASVDKGCSDEMVTIVSMLNLQQIFYRPKDKQQQADQKKAKFHDPTGDHLTLLNVYNAWKNSGYSNAWCFENYIQARAMRRARDVRQQIVKIMERHRHPIISCGRDTDKIRQALCAGFFRNTARKDPQEGYKTLTEGTPVYLHPSSALFGKQAEWVLYHELVLTTKEYMHFTTAIEPKWLVEAAPTFFKLAPTDRLSKRKKAERIQPLYNKYEGEDGWRLSAQRRAARPGGGGGTWG |
Putative pre-mRNA splicing factor | C | 677 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) , Synthetic Construct | TNMSIKEQRESLPVFQFRDQIIQAVKDNQILIVVGETGSGKTTQVTQYLAEAGFTKYGMIGCTQPRRVAAVSVAKRVAEEVGCQLGQEVGYTIRFEDVTSPATKIKYMTDGMLQREILMDPDLKRYSVIMLDEAHERTIATDVLFALLKKTVKRRPDLKVIVTSATLDAEKFSEYFNSCPIFTIPGRTFPVEILYSREPEPDYLEAALTTVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKALGPSVPELIILPIYSALPSEMQSRIFEPAPPGSRKVVIATNIAETAITIDYIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTIPDIQRQNLANTILLLKAMGINDLLRFDFMDPPPVNTMLTALEELYALGALDDEGLLTRLGRKMADFPMEPSLSKVLIASVDKGCSDEMVTIVSMLNLQQIFYRPKDKQQQADQKKAKFHDPTGDHLTLLNVYNAWKNSGYSNAWCFENYIQARAMRRARDVRQQIVKIMERHRHPIISCGRDTDKIRQALCAGFFRNTARKDPQEGYKTLTEGTPVYLHPSSALFGKQAEWVLYHELVLTTKEYMHFTTAIEPKWLVEAAPTFFKLAPTDRLSKRKKAERIQPLYNKYEGEDGWRLSAQRRAARPGGGGGTWG |
Putative pre-mRNA splicing factor | D | 677 | Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) , Synthetic Construct | TNMSIKEQRESLPVFQFRDQIIQAVKDNQILIVVGETGSGKTTQVTQYLAEAGFTKYGMIGCTQPRRVAAVSVAKRVAEEVGCQLGQEVGYTIRFEDVTSPATKIKYMTDGMLQREILMDPDLKRYSVIMLDEAHERTIATDVLFALLKKTVKRRPDLKVIVTSATLDAEKFSEYFNSCPIFTIPGRTFPVEILYSREPEPDYLEAALTTVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKALGPSVPELIILPIYSALPSEMQSRIFEPAPPGSRKVVIATNIAETAITIDYIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTIPDIQRQNLANTILLLKAMGINDLLRFDFMDPPPVNTMLTALEELYALGALDDEGLLTRLGRKMADFPMEPSLSKVLIASVDKGCSDEMVTIVSMLNLQQIFYRPKDKQQQADQKKAKFHDPTGDHLTLLNVYNAWKNSGYSNAWCFENYIQARAMRRARDVRQQIVKIMERHRHPIISCGRDTDKIRQALCAGFFRNTARKDPQEGYKTLTEGTPVYLHPSSALFGKQAEWVLYHELVLTTKEYMHFTTAIEPKWLVEAAPTFFKLAPTDRLSKRKKAERIQPLYNKYEGEDGWRLSAQRRAARPGGGGGTWG |
Nucleic Acids / Hybrid | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') | e | 11 | NA | UUUUUUUUUUU |
RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') | f | 11 | NA | UUUUUUUUUUU |
RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') | g | 11 | NA | UUUUUUUUUUU |
RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') | h | 11 | NA | UUUUUUUUUUU |
Method: X-RAY DIFFRACTION
Deposited Date: 2019-01-18 Deposition Author(s): Enders, M. , Ficner, R. , Hamann, F.