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FASTA Sequence PDB Format mmCIF Format
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6Q4T

Kod dna pol in a closed ternary complex with 7-deaza-7-(2-(2-hydroxyethoxy)-n-(prop-2-yn-1-yl)acetamide)-2-datp

PDB DOI: 10.2210/pdb6q4t/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Thermococcus Kodakarensis (Strain Atcc Baa-918 / Jcm 12380 / Kod1) , Synthetic Construct

Deposited: 2018-12-06
Deposition Author(s): Diederichs, K. , Kropp, H.M. , Marx, A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.997 Å

Literature

Kod dna pol in a closed ternary complex with 7-deaza-7-(2-(2-hydroxyethoxy)-n-(prop-2-yn-1-yl)acetamide)-2-datp

Diederichs, K. , Kropp, H.M. , Marx, A.

Primary Citation of Related Structures: 6Q4T


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase,DNA polymerase,DNA polymerase A 774 Thermococcus Kodakarensis (Strain Atcc Baa-918 / Jcm 12380 / Kod1) , Synthetic Construct MILDTDYITEDGKPVIRIFKKENGEFKIEYDRTFEPYFYALLKDDSAIEEVKKITAERHGTVVTVKRVEKVQKKFLGRPVEVWKLYFTHPQDVPAIRDKIREHPAVIDIYEYDIPFAKRYLIDKGLVPMEGDEELKMLAFAIATLYHEGEEFAEGPILMISYADEEGARVITWKNVDLPYVDVVSTEREMIKRFLRVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGINFALGRDGSEPKIQRMGDRFAVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAVFGQPKEKVYAEEITTAWETGENLERVARYSMEDAKVTYELGKEFLPMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAYERNELAPNKPDEKELARRRQSYEGGYVKEPERGLWENIVYLDFRSLYPSIIITHNVSPDTLNREGCKEYDVAPQVGHRFCKDFPGFIPSLLGDLLEERQKIKKKMKATIDPIERKLLDYRQRAIKILANSYYGYYGYARARWYCKECAESVTAWGREYITMTIKEIEEKYGFKVIYSDTDGFFATIPGADAETVKKKAMEFLKYINAKLPGALELEYEGFYKRGFFVTKKKYAVIDEEGKITTRGLEIVRRDWSEIAKETQARVLEALLKDGDVEKAVRIVKEVTEKLSKYEVPPEKLVIHEQITRDLKDYKATGPHVAVAKRLAARGVKIRPGTVISYIVLKGSGRIGDRAIPFDEFDPTKHKYDAEYYIENQVLPAVERILRAFGYRKEDLRYQKTRQVGLSAWLKPKGT

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*AP*AP*CP*TP*GP*TP*GP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3') t 16 NA AACTGTGGCCGTGGTC
DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*CP*AP*C)-3') p 12 NA GACCACGGCCAC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2018-12-06
Deposition Author(s): Diederichs, K. , Kropp, H.M. , Marx, A.