PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6PUW

Structure of hiv cleaved synaptic complex (csc) intasome bound with magnesium and bictegravir (bic)

PDB DOI: 10.2210/pdb6puw/pdb

Classification: VIRAL PROTEIN/DNA
Organism(s): Human Immunodeficiency Virus 1 , Saccharolobus Solfataricus (Strain Atcc 35092 / Dsm 1617 / Jcm 11322 / P2) , Synthetic Construct

Deposited: 2019-07-18
Deposition Author(s): Jozwik, I.K. , Lyumkis, D. , Passos, D.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.9 Å

6puw
Literature

Structure of hiv cleaved synaptic complex (csc) intasome bound with magnesium and bictegravir (bic)

Jozwik, I.K. , Lyumkis, D. , Passos, D.

Primary Citation of Related Structures: 6PUW


Proteins
Molecule Chains Sequence Length Organism Sequence
Chimeric Sso7d and HIV-1 integrase A 383 Human Immunodeficiency Virus 1 , Saccharolobus Solfataricus (Strain Atcc 35092 / Dsm 1617 / Jcm 11322 / P2) , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMATVKFKYKGEEKEVDISKIKKVWRVGKMISFTYDEGGGKTGRGAVSEKDAPKELLQMLEKQKKGGGGGGGGGGGFLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRDPVWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED
Chimeric Sso7d and HIV-1 integrase B 383 Human Immunodeficiency Virus 1 , Saccharolobus Solfataricus (Strain Atcc 35092 / Dsm 1617 / Jcm 11322 / P2) , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMATVKFKYKGEEKEVDISKIKKVWRVGKMISFTYDEGGGKTGRGAVSEKDAPKELLQMLEKQKKGGGGGGGGGGGFLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRDPVWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED
Chimeric Sso7d and HIV-1 integrase C 383 Human Immunodeficiency Virus 1 , Saccharolobus Solfataricus (Strain Atcc 35092 / Dsm 1617 / Jcm 11322 / P2) , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMATVKFKYKGEEKEVDISKIKKVWRVGKMISFTYDEGGGKTGRGAVSEKDAPKELLQMLEKQKKGGGGGGGGGGGFLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRDPVWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED
Chimeric Sso7d and HIV-1 integrase D 383 Human Immunodeficiency Virus 1 , Saccharolobus Solfataricus (Strain Atcc 35092 / Dsm 1617 / Jcm 11322 / P2) , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMATVKFKYKGEEKEVDISKIKKVWRVGKMISFTYDEGGGKTGRGAVSEKDAPKELLQMLEKQKKGGGGGGGGGGGFLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRDPVWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
viral DNA non-transferred strand e 27 NA ACTGCTAGAGATTTTCCCGCCCACGCT
viral DNA transferred strand f 25 NA AGCGTGGGCGGGAAAATCTCTAGCA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-07-18
Deposition Author(s): Jozwik, I.K. , Lyumkis, D. , Passos, D.