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6PUN

Crystal structure of a ternary complex of fbf-2 with lst-1 (site b) and compact fbe rna

PDB DOI: 10.2210/pdb6pun/pdb

Classification: RNA BINDING PROTEIN/RNA
Organism(s): Human Herpesvirus 6B (Strain Hst) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2019-07-18
Deposition Author(s): Campbell, Z.T. , Hall, T.M.T. , Qiu, C.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.099 Å

Literature

Crystal structure of a ternary complex of fbf-2 with lst-1 (site b) and compact fbe rna

Campbell, Z.T. , Hall, T.M.T. , Qiu, C.

Primary Citation of Related Structures: 6PUN


Proteins
Molecule Chains Sequence Length Organism Sequence
Fem-3 mRNA-binding factor 2 A 413 Human Herpesvirus 6B (Strain Hst) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GSNNVLPTWSLDSNGEMRSRLSLSEVLDSGDLMKFAVDKTGCQFLEKAVKGSLTSYQKFQLFEQVIGRKDDFLKLSTNIFGNYLVQSVIGISLATNDDGYTKRQEKLKNFISSQMTDMCLDKFACRVIQSSLQNMDLSLACKLVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIVDFVATPEHLRQICSDKYGCRVVQTIIEKLTADSMNVDLTSAAQNLRERALQRLMTSVTNRCQELATNEYANYIIQHIVSNDDLAVYRECIIEKCLMRNLLSLSQEKFASHVVEKAFLHAPLELLAEMMDEIFDGYIPHPDTGKDALDIMMFHQFGNYVVQCMLTICCDAVSGRRQTKEGGYDHAISFQDWLKKLHSRVTKERHRLSRFSSGKKMIETLANLRSTHPIYELQ
Fem-3 mRNA-binding factor 2 C 413 Human Herpesvirus 6B (Strain Hst) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GSNNVLPTWSLDSNGEMRSRLSLSEVLDSGDLMKFAVDKTGCQFLEKAVKGSLTSYQKFQLFEQVIGRKDDFLKLSTNIFGNYLVQSVIGISLATNDDGYTKRQEKLKNFISSQMTDMCLDKFACRVIQSSLQNMDLSLACKLVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIVDFVATPEHLRQICSDKYGCRVVQTIIEKLTADSMNVDLTSAAQNLRERALQRLMTSVTNRCQELATNEYANYIIQHIVSNDDLAVYRECIIEKCLMRNLLSLSQEKFASHVVEKAFLHAPLELLAEMMDEIFDGYIPHPDTGKDALDIMMFHQFGNYVVQCMLTICCDAVSGRRQTKEGGYDHAISFQDWLKKLHSRVTKERHRLSRFSSGKKMIETLANLRSTHPIYELQ
LST-1 E 29 Human Herpesvirus 6B (Strain Hst) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GSNSSGLRSQKLHLTYIEKNKRVRAMIPQ
LST-1 F 29 Human Herpesvirus 6B (Strain Hst) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GSNSSGLRSQKLHLTYIEKNKRVRAMIPQ

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(*CP*UP*GP*UP*GP*AP*AP*U)-3') b 8 NA CUGUGAAU
RNA (5'-R(*CP*UP*GP*UP*GP*AP*AP*U)-3') d 8 NA CUGUGAAU
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-07-18
Deposition Author(s): Campbell, Z.T. , Hall, T.M.T. , Qiu, C.