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6PTV

Crystal structure of a dnan sliding clamp (dna polymerase iii subunit beta) from rickettsia rickettsii bound to griselimycin

PDB DOI: 10.2210/pdb6ptv/pdb

Classification: TRANSFERASE/ANTIBIOTIC
Organism(s): Rickettsia Rickettsii (Strain Sheila Smith) , Synthetic Construct

Deposited: 2019-07-16
Deposition Author(s): Seattle Structural Genomics Center For Infectious Disease (Ssgcid)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.85 Å

6ptv
Literature

Crystal structure of a dnan sliding clamp (dna polymerase iii subunit beta) from rickettsia rickettsii bound to griselimycin

Seattle Structural Genomics Center For Infectious Disease (Ssgcid)

Primary Citation of Related Structures: 6PTV


Proteins
Molecule Chains Sequence Length Organism Sequence
Beta sliding clamp A 387 Rickettsia Rickettsii (Strain Sheila Smith) , Synthetic Construct MAHHHHHHMLKLIVETKTLVQSLGFASSVVEKRNVIPEYANIKLSAQDGNLELSSTNMDLYLSQKIAVQVVSEGECTVSTKTLNDIVRKLPDSELTLTDLGTTGLEIKGKNCKFNLFTLPVSSFPAMDSINPEASFKISCTDFAKIIESTKFSISLDETRYNLNGVYLHIKDKEFCSASTDGHRLSISWVTLEKQIKNFGVILPQKSAEEILKIVKDPKNINEDIEILLNSNKIKFICNENTIMLSKLIDGTFPDYSTFIPESSSSKLVINRKMFADSIERIAIITVEKFRAVKLSLSRETLEISAVGEARGNAKEVINSSQDKESFYEYNSDESLAIGFNPQYLEDVLKAVKSDLVELYFSDVSAPVLIKFPENPKDIFIVLPVKV
Beta sliding clamp B 387 Rickettsia Rickettsii (Strain Sheila Smith) , Synthetic Construct MAHHHHHHMLKLIVETKTLVQSLGFASSVVEKRNVIPEYANIKLSAQDGNLELSSTNMDLYLSQKIAVQVVSEGECTVSTKTLNDIVRKLPDSELTLTDLGTTGLEIKGKNCKFNLFTLPVSSFPAMDSINPEASFKISCTDFAKIIESTKFSISLDETRYNLNGVYLHIKDKEFCSASTDGHRLSISWVTLEKQIKNFGVILPQKSAEEILKIVKDPKNINEDIEILLNSNKIKFICNENTIMLSKLIDGTFPDYSTFIPESSSSKLVINRKMFADSIERIAIITVEKFRAVKLSLSRETLEISAVGEARGNAKEVINSSQDKESFYEYNSDESLAIGFNPQYLEDVLKAVKSDLVELYFSDVSAPVLIKFPENPKDIFIVLPVKV
Beta sliding clamp C 387 Rickettsia Rickettsii (Strain Sheila Smith) , Synthetic Construct MAHHHHHHMLKLIVETKTLVQSLGFASSVVEKRNVIPEYANIKLSAQDGNLELSSTNMDLYLSQKIAVQVVSEGECTVSTKTLNDIVRKLPDSELTLTDLGTTGLEIKGKNCKFNLFTLPVSSFPAMDSINPEASFKISCTDFAKIIESTKFSISLDETRYNLNGVYLHIKDKEFCSASTDGHRLSISWVTLEKQIKNFGVILPQKSAEEILKIVKDPKNINEDIEILLNSNKIKFICNENTIMLSKLIDGTFPDYSTFIPESSSSKLVINRKMFADSIERIAIITVEKFRAVKLSLSRETLEISAVGEARGNAKEVINSSQDKESFYEYNSDESLAIGFNPQYLEDVLKAVKSDLVELYFSDVSAPVLIKFPENPKDIFIVLPVKV
Beta sliding clamp D 387 Rickettsia Rickettsii (Strain Sheila Smith) , Synthetic Construct MAHHHHHHMLKLIVETKTLVQSLGFASSVVEKRNVIPEYANIKLSAQDGNLELSSTNMDLYLSQKIAVQVVSEGECTVSTKTLNDIVRKLPDSELTLTDLGTTGLEIKGKNCKFNLFTLPVSSFPAMDSINPEASFKISCTDFAKIIESTKFSISLDETRYNLNGVYLHIKDKEFCSASTDGHRLSISWVTLEKQIKNFGVILPQKSAEEILKIVKDPKNINEDIEILLNSNKIKFICNENTIMLSKLIDGTFPDYSTFIPESSSSKLVINRKMFADSIERIAIITVEKFRAVKLSLSRETLEISAVGEARGNAKEVINSSQDKESFYEYNSDESLAIGFNPQYLEDVLKAVKSDLVELYFSDVSAPVLIKFPENPKDIFIVLPVKV
ACE-MVA-MP8-NZC-LEU-MP8-LEU-MVA-PRO-MLU-GLY X 11 Rickettsia Rickettsii (Strain Sheila Smith) , Synthetic Construct XVPTLPLVPXG
ACE-MVA-MP8-NZC-LEU-MP8-LEU-MVA-PRO-MLU-GLY Y 11 Rickettsia Rickettsii (Strain Sheila Smith) , Synthetic Construct XVPTLPLVPXG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-07-16
Deposition Author(s): Seattle Structural Genomics Center For Infectious Disease (Ssgcid)