6PQR
Cryo-em structure of hztransib/intact tir substrate dna pre-reaction complex (prc)
PDB DOI: 10.2210/pdb6pqr/pdb
Classification: recombination/dna Organism(s): Helicoverpa Zea , Synthetic Construct
Deposited: 2019-07-09 Deposition Author(s): Liu, C. , Schatz, D.G. , Yang, Y.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.4 Å
Cryo-em structure of hztransib/intact tir substrate dna pre-reaction complex (prc)
Liu, C. , Schatz, D.G. , Yang, Y.
Primary Citation of Related Structures: 6PQR
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA-mediated transposase | A | 497 | Helicoverpa Zea , Synthetic Construct | KPAPSTIFSPEKALGLLLSLKLSKWQYITLRETTIREGSKEIYPSYYKVQKAKLQCYPPKAFVAVTDSSAKIALQALLDLTVNRIFETIRSPDAIQNKQLILISKWGFDGASNQSRYKQNIESGQGDSSIFMTSLVPLKLTADGDTVWVNPKPCSPMYCRPVQFSFVKETKDVVINEKTAMDDEIEALVPSKCQGHEISHKLMMTMIDGKICTYLSEAKSNAACYLCLAKPTEMSKLDVIASKTISSGVYEFGLSTLHARINVMECLLHIAYRLDFKKWSARGEGHQELLHSRKKLIQDRFKDDLNLLIDIVKQGSGTTNDGNTARRFFEFPDKTAAITGLDEDLIRRFSVILQAITSGEIIDVPKFKEYARTTAEKYVELYDWYYMSSTVHKLLIHGGDIIAENAIVPIGSLSEEASEARNKDFRRFREHHSRKKSRQASNEDILNMLIISSDPLISFTRPKLDAHKRQTYFKETVELLQLQDQEAPTEFHHHHHH |
| DNA-mediated transposase | D | 497 | Helicoverpa Zea , Synthetic Construct | KPAPSTIFSPEKALGLLLSLKLSKWQYITLRETTIREGSKEIYPSYYKVQKAKLQCYPPKAFVAVTDSSAKIALQALLDLTVNRIFETIRSPDAIQNKQLILISKWGFDGASNQSRYKQNIESGQGDSSIFMTSLVPLKLTADGDTVWVNPKPCSPMYCRPVQFSFVKETKDVVINEKTAMDDEIEALVPSKCQGHEISHKLMMTMIDGKICTYLSEAKSNAACYLCLAKPTEMSKLDVIASKTISSGVYEFGLSTLHARINVMECLLHIAYRLDFKKWSARGEGHQELLHSRKKLIQDRFKDDLNLLIDIVKQGSGTTNDGNTARRFFEFPDKTAAITGLDEDLIRRFSVILQAITSGEIIDVPKFKEYARTTAEKYVELYDWYYMSSTVHKLLIHGGDIIAENAIVPIGSLSEEASEARNKDFRRFREHHSRKKSRQASNEDILNMLIISSDPLISFTRPKLDAHKRQTYFKETVELLQLQDQEAPTEFHHHHHH |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*CP*TP*AP*GP*AP*TP*CP*TP*CP*AP*CP*GP*GP*TP*GP*GP*AP*TP*CP*GP*AP*AP*AP*A)-3') | b | 24 | NA | CTAGATCTCACGGTGGATCGAAAA |
| DNA (5'-D(*CP*TP*AP*GP*AP*TP*CP*TP*CP*AP*CP*GP*GP*TP*GP*GP*AP*TP*CP*GP*AP*AP*AP*A)-3') | e | 24 | NA | CTAGATCTCACGGTGGATCGAAAA |
| DNA (5'-D(P*TP*TP*TP*TP*CP*GP*AP*TP*CP*CP*AP*CP*CP*GP*TP*GP*AP*GP*AP*TP*CP*TP*AP*G)-3') | c | 24 | NA | TTTTCGATCCACCGTGAGATCTAG |
| DNA (5'-D(P*TP*TP*TP*TP*CP*GP*AP*TP*CP*CP*AP*CP*CP*GP*TP*GP*AP*GP*AP*TP*CP*TP*AP*G)-3') | f | 24 | NA | TTTTCGATCCACCGTGAGATCTAG |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2019-07-09 Deposition Author(s): Liu, C. , Schatz, D.G. , Yang, Y.