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6PPV

Structure of s. pombe lsm1-7 with rna, polyuridine with 3' guanosine

PDB DOI: 10.2210/pdb6ppv/pdb

Classification: RNA BINDING PROTEIN/RNA
Organism(s): Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) , Synthetic Construct

Deposited: 2019-07-08
Deposition Author(s): Butcher, S.E. , Montemayor, E.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.05 Å

6ppv
Literature

Structure of s. pombe lsm1-7 with rna, polyuridine with 3' guanosine

Butcher, S.E. , Montemayor, E.J.

Primary Citation of Related Structures: 6PPV


Proteins
Molecule Chains Sequence Length Organism Sequence
U6 snRNA-associated Sm-like protein LSm1 A 86 Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) , Synthetic Construct GSMNQATQIIPFTTSGSLVDYVDRKVIVVLRDGKKLIGILRSFDQFANLMLQYTIERIYVDDMYGDIDRGVYIVRGENVVLLGELD
U6 snRNA-associated Sm-like protein LSm2 B 96 Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) , Synthetic Construct MLFYSFFKTLIDTEVTVELKNDMSIRGILKSVDQFLNVKLENISVVDASKYPHMAAVKDLFIRGSVVRYVHMSSAYVDTILLADACRRDLANNKRQ
Probable U6 snRNA-associated Sm-like protein LSm3 C 95 Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) , Synthetic Construct GSMESAQAVAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHYEMLFVRGDSVILIAPPRN
Probable U6 snRNA-associated Sm-like protein LSm4 D 129 Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) , Synthetic Construct MLPLTLLNATQGRPILVELKNGETFNGHLENCDNYMNLTLREVIRTMPDGDKFFRLPECYIRGNNIKYLRIQDEVLSQVAKQQAQQRENRGSRFRGRGQRGRGNYGHTAPNRRGRGRGGHMWSHPQFEK
U6 snRNA-associated Sm-like protein LSm5 E 80 Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) , Synthetic Construct MSMTILPLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTEYDTVTGVTEKHSEMLLNGNGMCMLIPGGKPE
U6 snRNA-associated Sm-like protein LSm6 F 77 Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) , Synthetic Construct GSMDSSPNEFLNKVIGKKVLIRLSSGVDYKGILSCLDGYMNLALERTEEYVNGKKTNVYGDAFIRGNNVLYVSALDD
U6 snRNA-associated Sm-like protein LSm7 G 113 Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) , Synthetic Construct MSSLQKRPGPGNSSQPTERPRKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIAPMDGSEEIPNPFVQAE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(*AP*UP*UP*UP*UP*G)-3') h 6 NA AUUUUG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-07-08
Deposition Author(s): Butcher, S.E. , Montemayor, E.J.