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FASTA Sequence PDB Format mmCIF Format
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6PPU

Cryo-em structure of adnab-amppnp-dna complex

PDB DOI: 10.2210/pdb6ppu/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Mycobacterium Smegmatis , Mycobacterium Smegmatis (Strain Atcc 700084 / Mc(2)155) , Mycolicibacterium Smegmatis , Synthetic Construct

Deposited: 2019-07-08
Deposition Author(s): Jia, N. , Patel, D.J. , Shuman, S. , Unciuleac, M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.5 Å

6ppu
Literature

Cryo-em structure of adnab-amppnp-dna complex

Jia, N. , Patel, D.J. , Shuman, S. , Unciuleac, M.

Primary Citation of Related Structures: 6PPU


Proteins
Molecule Chains Sequence Length Organism Sequence
UvrD/REP helicase B 1095 Mycobacterium Smegmatis , Mycobacterium Smegmatis (Strain Atcc 700084 / Mc(2)155) , Mycolicibacterium Smegmatis , Synthetic Construct MTQVASPVVQARYSPVELSAALGLFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGFATPSQVLGLTFTRKAAGQLLRRVRTRLARLAGAGLAPGSGASDESATVSTYHAFAGTLLREHGLLLPVEPDTRLLSETELWQLAYDVVCAHPGHLDTEKTPAAVTAMVLRLSGALAEHLVDTDQLRDTHVELERLVHTLPAGPYQRDRGPSQWLLRMLATQTERTELVPLIDALHQRMRAEKVMDFGMQMAAAARLAARFPQVGEQLRQRFRVVLLDEYQDTGHAQRIALSSLFGGGADDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPYSDGTPAPTLELRTSWRNPPSTLHVANAVSEEARRRSVAVRALRPRPDAEPGTIRCALLNNVAAERDWVADHLARAYHGAIGRGEAAPTAAVLVRRNADAAPMAEALTARGVPVEVVGVAGLLAVPEVADLVAMLRLIADPTAGSAVMRILTGPRWRFGARDIAALWRRAVELDDRPKGELGTADIVAQAAPDADTACVADAICDPGDAERYSPAGYERIVALGRELTMLRAHLGHPLPELVAEVRRVLGLDAEARAARPVAAGWAGTENLDRFSDLVSDFAGHAGASVSALLAYLDAAVEVENGLAPAELTVSHDRVQILTVHAAKGLEWQVVAVPHLSARVFPSTTQARTWLTDASDLPPLLRGDRATESEIGVPVLDTSDIYDRKILSDKISDHKKSLDQRRVDEERRLLYVAITRAEDTLLLSGHHWGATESKPRGPSEFLCELKTILEEATAAGTPCGEIEHWAPDPAPGETNPLRDQVVEALWPPVASADDHVHRGAQLVAAAMAGEVSAEADQEGWAADVDALLAERERPPQQEDTELPGQLSVSTLVELSRDPKAALTRLRRRLPQRPDPHALLGTTFHEWVQRYFHAERLFDLDDLPGAVDSDSGRAVEESLAELQDAFVKSPWAARTPVEVEVPFDMVLGETVVRGRIDAVFAEPDGTTMVLDWKTGDPPETPEAKEHAAVQLAVYRLAWAAMRGCPPESVRAAFHYVRSGQTVIPETLPGAEELVKLLAAAPTETAEEADRIT
ATP-dependent DNA helicase (UvrD/REP) A 724 Mycobacterium Smegmatis , Mycobacterium Smegmatis (Strain Atcc 700084 / Mc(2)155) , Mycolicibacterium Smegmatis , Synthetic Construct XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTVTVRLAASTHAEGTMIADALRRAHLVDGIPWSQMAVIVRSVPRVGTALARALTAAGVPVQDNGTDVPVGRQPAAAALLTVLDVTATGHLDADSAVALLTGPIGRVDPVTLRQLRRALRRADGSQPPRDFGDLLVDAIEREPKGLSAEHARTLRRLRAVLTAARRSDASGADPRYTLWQAWHASGLQRRWLAASERGGSVGAQADRDLDAVTTLFDVADQYVNRTAGASLRGLVDHVTRLGAAVARTEPETAAEAVAVLSVHGALAGEWDFVVIAGVQEGLWPNMIPRGGVLGTQHLVDVLDGVADMTDRTVSTRAPLVAEERRLLMAAMGRARTRVMITAVDSXXXXXXXXXXXXXPPLVAPRVLAPSALVGRLRAVVCAPDGAVDDDARACAAAQLARLAAAGVPGADPSQWHAMTSLTTEEPLWSEPGHVVTLSPSTLQMLTDCPLRWLLERHGGDDGRDVRSTVGSLVHALVSEPGKTESQLVNELEKVWDDLPYDAKWYSDNELARHRAMLETFTRWREDTRRQLTEVATEIPVEGIVVEPGENTPGVRVRGRLDRLERDEAGRLVVVDLKTGKSPVTKDDAQNHAQLAMYQLAVAAGLLDDGDEPGGGKLVYLGKAGAAGATEREQDPLTPDKRAEWLETVGEAAAATAGPRFVARVNNGCANCPVRSSCPAQANGDRP

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (29-MER) x 70 NA TTTTTTTCTAATGCGAGCACTGCTATTCCCTAGCAGTGCTCGCATTAGATTTTGTTTTTTTAGCGGTTTT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-07-08
Deposition Author(s): Jia, N. , Patel, D.J. , Shuman, S. , Unciuleac, M.