6PPR
Cryo-em structure of adna(d934a)-adnb(d1014a) in complex with amppnp and dna
PDB DOI: 10.2210/pdb6ppr/pdb
Classification: DNA BINDING PROTEIN/DNA Organism(s): Mycobacterium Smegmatis , Synthetic Construct
Deposited: 2019-07-08 Deposition Author(s): Jia, N. , Patel, D.J. , Shuman, S. , Unciuleac, M.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.5 Å
Cryo-em structure of adna(d934a)-adnb(d1014a) in complex with amppnp and dna
Jia, N. , Patel, D.J. , Shuman, S. , Unciuleac, M.
Primary Citation of Related Structures: 6PPR
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| UvrD/REP helicase | B | 1095 | Mycobacterium Smegmatis , Synthetic Construct | MTQVASPVVQARYSPVELSAALGLFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGFATPSQVLGLTFTRKAAGQLLRRVRTRLARLAGAGLAPGSGASDESATVSTYHAFAGTLLREHGLLLPVEPDTRLLSETELWQLAYDVVCAHPGHLDTEKTPAAVTAMVLRLSGALAEHLVDTDQLRDTHVELERLVHTLPAGPYQRDRGPSQWLLRMLATQTERTELVPLIDALHQRMRAEKVMDFGMQMAAAARLAARFPQVGEQLRQRFRVVLLDEYQDTGHAQRIALSSLFGGGADDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPYSDGTPAPTLELRTSWRNPPSTLHVANAVSEEARRRSVAVRALRPRPDAEPGTIRCALLNNVAAERDWVADHLARAYHGAIGRGEAAPTAAVLVRRNADAAPMAEALTARGVPVEVVGVAGLLAVPEVADLVAMLRLIADPTAGSAVMRILTGPRWRFGARDIAALWRRAVELDDRPKGELGTADIVAQAAPDADTACVADAICDPGDAERYSPAGYERIVALGRELTMLRAHLGHPLPELVAEVRRVLGLDAEARAARPVAAGWAGTENLDRFSDLVSDFAGHAGASVSALLAYLDAAVEVENGLAPAELTVSHDRVQILTVHAAKGLEWQVVAVPHLSARVFPSTTQARTWLTDASDLPPLLRGDRATESEIGVPVLDTSDIYDRKILSDKISDHKKSLDQRRVDEERRLLYVAITRAEDTLLLSGHHWGATESKPRGPSEFLCELKTILEEATAAGTPCGEIEHWAPDPAPGETNPLRDQVVEALWPPVASADDHVHRGAQLVAAAMAGEVSAEADQEGWAADVDALLAERERPPQQEDTELPGQLSVSTLVELSRDPKAALTRLRRRLPQRPDPHALLGTTFHEWVQRYFHAERLFDLDDLPGAVDSDSGRAVEESLAELQDAFVKSPWAARTPVEVEVPFDMVLGETVVRGRIDAVFAEPDGTTMVLAWKTGDPPETPEAKEHAAVQLAVYRLAWAAMRGCPPESVRAAFHYVRSGQTVIPETLPGAEELVKLLAAAPTETAEEADRIT |
| ATP-dependent DNA helicase (UvrD/REP) | A | 1045 | Mycobacterium Smegmatis , Synthetic Construct | MTTRPAESAPQTASTLLEPGSNGVVRLLGGPGTGKSSLLVDTAVQHILAGADPESVLLLTGSARLRTAARAAITARLLGAGTVGVVREPLVRTVHSYAFAVLRLAAQRNGDPPPRLITSAEQDGIIRELLAGDLEDGHRSPVGWPEQLWPALTTAGFATELRDLMARCTERGVDPIALQRLGRTAKRPEWLAAGRFAQAYEQIMLLRSAVGMAAPQATVPALGAAELVGAALEALGADDELLDTERNRIKLLLVDDAQHLDPQAARLVRALAAGTGLTVIAGDPDQSVFGYRGADPVLLRDDTHPAITLTQSYRCAPEIASAITGLGQRLPGVSDTRHWTGNPQREGTVTVRLAASTHAEGTMIADALRRAHLVDGIPWSQMAVIVRSVPRVGTALARALTAAGVPVQDNGTDVPVGRQPAAAALLTVLDVTATGHLDADSAVALLTGPIGRVDPVTLRQLRRALRRADGSQPPRDFGDLLVDAIEREPKGLSAEHARTLRRLRAVLTAARRSDASGADPRYTLWQAWHASGLQRRWLAASERGGSVGAQADRDLDAVTTLFDVADQYVNRTAGASLRGLVDHVTRLGAAVARTEPETAAEAVAVLSVHGALAGEWDFVVIAGVQEGLWPNMIPRGGVLGTQHLVDVLDGVADMTDRTVSTRAPLVAEERRLLMAAMGRARTRVMITAVDSDTGDESLLPSPFCAEISAWATEPVAEPPLVAPRVLAPSALVGRLRAVVCAPDGAVDDDARACAAAQLARLAAAGVPGADPSQWHAMTSLTTEEPLWSEPGHVVTLSPSTLQMLTDCPLRWLLERHGGDDGRDVRSTVGSLVHALVSEPGKTESQLVNELEKVWDDLPYDAKWYSDNELARHRAMLETFTRWREDTRRQLTEVATEIPVEGIVVEPGENTPGVRVRGRLDRLERDEAGRLVVVALKTGKSPVTKDDAQNHAQLAMYQLAVAAGLLDDGDEPGGGKLVYLGKAGAAGATEREQDPLTPDKRAEWLETVGEAAAATAGPRFVARVNNGCANCPVRSSCPAQANGDRP |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (70-MER) | x | 70 | NA | TTTTTTTCTAATGCGAGCACTGCTATTCCCTAGCAGTGCTCGCATTAGATTTTGTTTTTTTAGCGGTTTT |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2019-07-08 Deposition Author(s): Jia, N. , Patel, D.J. , Shuman, S. , Unciuleac, M.