PDBi (Protein Data Bank in India)

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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6PPH

Kaposi's sarcoma-associated herpesvirus (kshv), c1 penton vertex register, catc-binding structure

PDB DOI: 10.2210/pdb6pph/pdb

Classification: VIRAL PROTEIN
Organism(s): Human Herpesvirus 8

Deposited: 2019-07-06
Deposition Author(s): Bi, G.Q. , Dai, X. , Gong, D. , Jih, J. , Liu, Y.T. , Sun, R. , Zhou, Z.H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.8 Å

6pph
Literature

Kaposi's sarcoma-associated herpesvirus (kshv), c1 penton vertex register, catc-binding structure

Bi, G.Q. , Dai, X. , Gong, D. , Jih, J. , Liu, Y.T. , Sun, R. , Zhou, Z.H.

Primary Citation of Related Structures: 6PPH


Proteins
Molecule Chains Sequence Length Organism Sequence
Capsid vertex component 1 K 454 Human Herpesvirus 8 MDAHAINERYVGPRCHRLAHVVLPRTFLLHHAIPLEPEIIFSTYTRFSRSPGSSRRLVVCGKRVLPGEENQLASSPSGLALSLPLFSHDGNFHPFDISVLRISCPGSNLSLTVRFLYLSLVVAMGAGRNNARSPTVDGVSPPEGAVAHPLEELQRLARATPDPAPTRGPLQVLTGLLRAGSDGDRATHHMALEAPGTVRGESLDPPVSQKGPARTRHRPPPVRLSFNPVNADVPATWRDATNVYSGAPYYVCVYERGGRQEDDWLPIPLSFPEEPVPPPPSLVFMDDLFINTKQCDFVDTLEAACRTQGYTLRQRVPVAIPRDAEIADAVKSHFLEACLVLRGLASEASAWIRAATSPPLGRHACWMDVLGLWESRPHTLGLELRGVNCGGTDGDWLEILKQPDVQKTVSGSLVACVIVTPALEAWLVLPGGFAIKGRYRASKEDLVFIRGRYG
Capsid vertex component 2 L 549 Human Herpesvirus 8 MLTSERSYLRYPKNRRWTEAGRFWAPHPENVLFIHKPTMEETRRVALGLRSQLVRNRERKTKAHLLSLELDRLVQVHDSRVRVINADIDAVKQMIGNMTWSDNIDMPQSRSHEPPLVTSPPQASHRNFTVAIVPGDPHFSVDRDLRGELMPTLYMNQNQWLPSFGPWFISLTDNAMQRRVFPKELKGTVNFQNSTSLKLISHTLTTVASTTADFFADARHLTDTQAALCLVNAYFCQKTSRQLPATPDDLLADLPQKLDLLITQLKQESGPGDFSFTYSNPQERASLAPLNKESRYPTAFFQRHKLHAMMAKAGLFPHNKGTGAPGTAPAMDLVFAITSAMFGSDIPPFSAYQWNLRAGIVALEVFILAYGLLEFGQVARGHPNRRLNLVSLLGPKFQPGALPDPNAPMLKRGQLFSFISEHYIIPTLQANPNAPVSFIFPGIILAALEARSTVSHKQPGPFVNLTGSRFNEIFEILNQQLTFRDPLALLQARTALRLATEEGLDVLLSHPSPPTLLQEIIKSQFGGGDDYDRAYFMVLGCLPVVLAVV
Capsid vertex component 2 M 549 Human Herpesvirus 8 MLTSERSYLRYPKNRRWTEAGRFWAPHPENVLFIHKPTMEETRRVALGLRSQLVRNRERKTKAHLLSLELDRLVQVHDSRVRVINADIDAVKQMIGNMTWSDNIDMPQSRSHEPPLVTSPPQASHRNFTVAIVPGDPHFSVDRDLRGELMPTLYMNQNQWLPSFGPWFISLTDNAMQRRVFPKELKGTVNFQNSTSLKLISHTLTTVASTTADFFADARHLTDTQAALCLVNAYFCQKTSRQLPATPDDLLADLPQKLDLLITQLKQESGPGDFSFTYSNPQERASLAPLNKESRYPTAFFQRHKLHAMMAKAGLFPHNKGTGAPGTAPAMDLVFAITSAMFGSDIPPFSAYQWNLRAGIVALEVFILAYGLLEFGQVARGHPNRRLNLVSLLGPKFQPGALPDPNAPMLKRGQLFSFISEHYIIPTLQANPNAPVSFIFPGIILAALEARSTVSHKQPGPFVNLTGSRFNEIFEILNQQLTFRDPLALLQARTALRLATEEGLDVLLSHPSPPTLLQEIIKSQFGGGDDYDRAYFMVLGCLPVVLAVV
Large tegument protein deneddylase N 2635 Human Herpesvirus 8 MAAQPLYMEGMASTHQANCIFGEHAGSQCLSNCVMYLASSYYNSETPLVDRASLDDVLEQGMRLDLLLRKSGMLGFRQYAQLHHIPGFLRTDDWATKIFQSPEFYGLIGQDAAIREPFIESLRSVLSRNYAGTVQYLIIICQSKAGAIVVKDKTYYMFDPHCIPNIPNSPAHVIKTNDVGVLLPYIATHDTEYTGCFLYFIPHDYISPEHYIANHYRTIVFEELHGPRMDISRGVESCSITEITSPSVSPAPSEAPLRRDSTQSQDETRPRRPRVVIPPYDPTDRPRPPHQDRPPEQAAGYGGNKGRGGNKGRGGKTGRGGNEGRGGHQPPDEHQPPHITAEHMDQSDGQGADGDMDSTPANGETSVTETPGPEPNPPARPDREPPPTPPATPGATALLSDLTATRGQKRKFSSLKESYPIDSPPSDDDDVSQPSQQTAPDTEDIWIDDPLTPLYPLTDTPSFDITADVTPDNTHPEKAADGDFTNKTTSTDADRYASASQESLGTLVSPYDFTNLDTLLAELGRLGTAQPIPVIVDRLTSRPFREASALQAMDRILTHVVLEYGLVSGYSTAAPSKCTHVLQFFILWGEKLGIPTEDAKTLLESALEIPAMCEIVQQGRLKEPTFSRHIISKLNPCLESLHATSRQDFKSLIQAFNAEGIRIASRERETSMAELIETITARLKPNFNIVCARQDAQTIQDGVGLLRAEVNKRNAQIAQEAAYFENIITALSTFQPPPQSQQTFEVLPDLKLRTLVEHLTLVEAQVTTQTVESLQAYLQSAATAEHHLTNVPNVHSILSNISNTLKVIDYVIPKFIINTDTLAPYKQQFSYLGGELASMFSLDWPHAPAEAVEPLPVLTSLRGKIAEALTRQENKNAVDQILTDAEGLLKNITDPNGAHFHAQAVSIPVLENYVHNAGVLLKGEKSERFSRLKTAIQNLVSSESFITVTLHSTNLGNLVTNVPKLGEAFTGGPHLLTSPSVRQSLSTLCTTLLRDALDALEKKDPALLGEGTTLALETLLGYGSVQDYKETVQIISSLVGIQKLVRDQGADKWATAVTRLTDLKSTLATTAIETATKRKLYRLIQRDLKEAQKHETNRAMEEWKQKVLALDNASPERVATLLQQAPTAKAREFAEKHFKILLPVPADAPVQASPTPMEYSASPLPDPKDIDRATSIHGEQAWKKIQQAFKDFNFAVLRPADWDALAAEYQRRGSPLPAAVGPALSGFLETILGTLNDIYMDKLRSFLPDAQPFQAPPFDWLTPYQDQVSFFLRTIGLPLVRALADKISVQALRLSHALQSGDLQQATVGTPLELPATEYARIASNMKSVFNDHGLQVRSEVADYVEAQRADAHTPHVPRPKIQAPKTLIPHPDAIVADGLPAFLKTSLLQQEAKLLALQRADFESLESDMRAAEAQRKASREETQRKMAHAITQLLQQAPSAISGRPLSLQDPVGFLEGIIYDKVLERESYETGLEGLSWLEQTIKSITVYAPVEEKQRMHVLLDEVKKQRANTETALELEAAATHGDDARLLQRAVDELSPLRVKGGKAAVESWRQKIQTLKSLVQEAEQAGLLLATIDTVAGQAQETISPSTLQGLYQQGQEAMAAIKRFRDSPQLAGLQEKLAELQQYVKYKKQYLEHFEATQSVVFTAFPLTQEVTIPALHYAGPFDNLERLSRYLHIGQTQPAPGQWLLTLPTFDPTRPACVPAGGHEPPLHRQVVFSSFLEAQIRLALSVAGPVPGRGLPGTPQIRRGVEAAACFLHQWDEISRLLPEVLDTFFHNAPLPAESSSNAFLAMCVLTHLVYLAGRAVLGPREPEHAAPDAYPREVALAPRDLTYLLLAMWPSWISAILKQPSHAEAAHACLVTLPTMLKAVPYLTLEASAGPLPADMRHFATPEARLFFPARWHHVNVQEKLWLRNDFMSLCHRSPGRARIAVLVWAVTCLDPEVIRQLWSTLRPLTADESDTASGLLRVLVEMEFGPPPKTPRREAVAPGATLPPYPYGLATGERLVGQAQERSGGAGKMPVSGFEIVLGALLFRAPLRIFSTASTHRISDFEGGFQILTPLLDCCPDREPFASLAAAPRRTVPLGDPCANIHTPEEIQIFARQAAWLQYTFANYQIPSTDNPIPIVVLNANNNLENSYIPRDRKADPLRPFYVVPLKPQGRWPEIMTTATTPCRLPTSPEEAGSQFARLLQSQVSATWSDIFSRVPERLAPNATQKSSQTMSEIHEVAATPPLTITPNKPTGTPHVSPEADPITERKRGQQPKIVADNMPSRILPSLPTPKPREPRITLPHALPVISPPAHRPSPIPHLPAPQVTEPKGVLQSKRGTLVLRPAAVIDPRKPVSAPITRYERTALQPPRTEGEGRRPPDTQPVTLTFRLPPTAPTPATAALETKTTPPSTPPHAIDISPPQTPPMSTSPHARDTSPPAEKRAAPVIRVMAPTQPSGEARVKRVEIEQGLSTRNEAPPLERSNHAVPAVTPRRTVAREIRIPPEIKAGWDTAPDIPLPHSSPESSPPTSPQPIRVDDKSPLPNLVERYARGFLDTPSVEVMSLENQDIAVDPGLLTRRIPSVVPMPHPIMWSPIVPISLQNTDIDTAKITLISFIRRIKQKVAALSASLAETVDRIKKWYL
Large tegument protein deneddylase O 2635 Human Herpesvirus 8 MAAQPLYMEGMASTHQANCIFGEHAGSQCLSNCVMYLASSYYNSETPLVDRASLDDVLEQGMRLDLLLRKSGMLGFRQYAQLHHIPGFLRTDDWATKIFQSPEFYGLIGQDAAIREPFIESLRSVLSRNYAGTVQYLIIICQSKAGAIVVKDKTYYMFDPHCIPNIPNSPAHVIKTNDVGVLLPYIATHDTEYTGCFLYFIPHDYISPEHYIANHYRTIVFEELHGPRMDISRGVESCSITEITSPSVSPAPSEAPLRRDSTQSQDETRPRRPRVVIPPYDPTDRPRPPHQDRPPEQAAGYGGNKGRGGNKGRGGKTGRGGNEGRGGHQPPDEHQPPHITAEHMDQSDGQGADGDMDSTPANGETSVTETPGPEPNPPARPDREPPPTPPATPGATALLSDLTATRGQKRKFSSLKESYPIDSPPSDDDDVSQPSQQTAPDTEDIWIDDPLTPLYPLTDTPSFDITADVTPDNTHPEKAADGDFTNKTTSTDADRYASASQESLGTLVSPYDFTNLDTLLAELGRLGTAQPIPVIVDRLTSRPFREASALQAMDRILTHVVLEYGLVSGYSTAAPSKCTHVLQFFILWGEKLGIPTEDAKTLLESALEIPAMCEIVQQGRLKEPTFSRHIISKLNPCLESLHATSRQDFKSLIQAFNAEGIRIASRERETSMAELIETITARLKPNFNIVCARQDAQTIQDGVGLLRAEVNKRNAQIAQEAAYFENIITALSTFQPPPQSQQTFEVLPDLKLRTLVEHLTLVEAQVTTQTVESLQAYLQSAATAEHHLTNVPNVHSILSNISNTLKVIDYVIPKFIINTDTLAPYKQQFSYLGGELASMFSLDWPHAPAEAVEPLPVLTSLRGKIAEALTRQENKNAVDQILTDAEGLLKNITDPNGAHFHAQAVSIPVLENYVHNAGVLLKGEKSERFSRLKTAIQNLVSSESFITVTLHSTNLGNLVTNVPKLGEAFTGGPHLLTSPSVRQSLSTLCTTLLRDALDALEKKDPALLGEGTTLALETLLGYGSVQDYKETVQIISSLVGIQKLVRDQGADKWATAVTRLTDLKSTLATTAIETATKRKLYRLIQRDLKEAQKHETNRAMEEWKQKVLALDNASPERVATLLQQAPTAKAREFAEKHFKILLPVPADAPVQASPTPMEYSASPLPDPKDIDRATSIHGEQAWKKIQQAFKDFNFAVLRPADWDALAAEYQRRGSPLPAAVGPALSGFLETILGTLNDIYMDKLRSFLPDAQPFQAPPFDWLTPYQDQVSFFLRTIGLPLVRALADKISVQALRLSHALQSGDLQQATVGTPLELPATEYARIASNMKSVFNDHGLQVRSEVADYVEAQRADAHTPHVPRPKIQAPKTLIPHPDAIVADGLPAFLKTSLLQQEAKLLALQRADFESLESDMRAAEAQRKASREETQRKMAHAITQLLQQAPSAISGRPLSLQDPVGFLEGIIYDKVLERESYETGLEGLSWLEQTIKSITVYAPVEEKQRMHVLLDEVKKQRANTETALELEAAATHGDDARLLQRAVDELSPLRVKGGKAAVESWRQKIQTLKSLVQEAEQAGLLLATIDTVAGQAQETISPSTLQGLYQQGQEAMAAIKRFRDSPQLAGLQEKLAELQQYVKYKKQYLEHFEATQSVVFTAFPLTQEVTIPALHYAGPFDNLERLSRYLHIGQTQPAPGQWLLTLPTFDPTRPACVPAGGHEPPLHRQVVFSSFLEAQIRLALSVAGPVPGRGLPGTPQIRRGVEAAACFLHQWDEISRLLPEVLDTFFHNAPLPAESSSNAFLAMCVLTHLVYLAGRAVLGPREPEHAAPDAYPREVALAPRDLTYLLLAMWPSWISAILKQPSHAEAAHACLVTLPTMLKAVPYLTLEASAGPLPADMRHFATPEARLFFPARWHHVNVQEKLWLRNDFMSLCHRSPGRARIAVLVWAVTCLDPEVIRQLWSTLRPLTADESDTASGLLRVLVEMEFGPPPKTPRREAVAPGATLPPYPYGLATGERLVGQAQERSGGAGKMPVSGFEIVLGALLFRAPLRIFSTASTHRISDFEGGFQILTPLLDCCPDREPFASLAAAPRRTVPLGDPCANIHTPEEIQIFARQAAWLQYTFANYQIPSTDNPIPIVVLNANNNLENSYIPRDRKADPLRPFYVVPLKPQGRWPEIMTTATTPCRLPTSPEEAGSQFARLLQSQVSATWSDIFSRVPERLAPNATQKSSQTMSEIHEVAATPPLTITPNKPTGTPHVSPEADPITERKRGQQPKIVADNMPSRILPSLPTPKPREPRITLPHALPVISPPAHRPSPIPHLPAPQVTEPKGVLQSKRGTLVLRPAAVIDPRKPVSAPITRYERTALQPPRTEGEGRRPPDTQPVTLTFRLPPTAPTPATAALETKTTPPSTPPHAIDISPPQTPPMSTSPHARDTSPPAEKRAAPVIRVMAPTQPSGEARVKRVEIEQGLSTRNEAPPLERSNHAVPAVTPRRTVAREIRIPPEIKAGWDTAPDIPLPHSSPESSPPTSPQPIRVDDKSPLPNLVERYARGFLDTPSVEVMSLENQDIAVDPGLLTRRIPSVVPMPHPIMWSPIVPISLQNTDIDTAKITLISFIRRIKQKVAALSASLAETVDRIKKWYL
Triplex capsid protein 1 5 331 Human Herpesvirus 8 MKVQAENAARLGRQVLGLLPPPTHRVSLTRGPEFARGVRDLLSKYAASTRPTVGSLHEALRQAPFRQPTYGDFLVYSQTFSPQEPLGTFLFSFKQEDNGSSMDMLLTPTSLFMLSGMEAAKAPQTHKVAGVWYGSGSGLADFIPNLSELMDTGEFHTLLTPVGPMVQSVHSTFVTKVTSAMKGVGLARDEPRAHVGLTLPCDMLVDLDESCPMVQRREPAGLNVTIYASLVYLRVNQRPSMALTFFQSGKGFAEVVAMIKDHFTDVIRTKYIQLRHELYINRLVFGAVCTLGTVPFDSHPVHQSLNVKGTSLPVLVFANFEAACGPWTVFL
Triplex capsid protein 1 B 331 Human Herpesvirus 8 MKVQAENAARLGRQVLGLLPPPTHRVSLTRGPEFARGVRDLLSKYAASTRPTVGSLHEALRQAPFRQPTYGDFLVYSQTFSPQEPLGTFLFSFKQEDNGSSMDMLLTPTSLFMLSGMEAAKAPQTHKVAGVWYGSGSGLADFIPNLSELMDTGEFHTLLTPVGPMVQSVHSTFVTKVTSAMKGVGLARDEPRAHVGLTLPCDMLVDLDESCPMVQRREPAGLNVTIYASLVYLRVNQRPSMALTFFQSGKGFAEVVAMIKDHFTDVIRTKYIQLRHELYINRLVFGAVCTLGTVPFDSHPVHQSLNVKGTSLPVLVFANFEAACGPWTVFL
Triplex capsid protein 2 6 305 Human Herpesvirus 8 MALDKSIVVNLTSRLFADELAALQSKIGSVLPLGDCHRLQNIQALGLGCVCSRETSPDYIQIMQYLSKCTLAVLEEVRPDSLRLTRMDPSDNLQIKNVYAPFFQWDSNTQLAVLPPLFSRKDSTIVLESNGFDIVFPMVVPQQLGHAILQQLLVYHIYSKISAGAPGDVNMAELDLYTTNVSFMGRTYRLDVDNTDPRTALRVLDDLSMYLCILSALVPRGCLRLLTALVRHDRHPLTEVFEGVVPDEVTRIDLDQLSVPDDITRMRVMFSYLQSLSSIFNLGPRLHVYAYSAETLAASCWYSPR
Triplex capsid protein 2 7 305 Human Herpesvirus 8 MALDKSIVVNLTSRLFADELAALQSKIGSVLPLGDCHRLQNIQALGLGCVCSRETSPDYIQIMQYLSKCTLAVLEEVRPDSLRLTRMDPSDNLQIKNVYAPFFQWDSNTQLAVLPPLFSRKDSTIVLESNGFDIVFPMVVPQQLGHAILQQLLVYHIYSKISAGAPGDVNMAELDLYTTNVSFMGRTYRLDVDNTDPRTALRVLDDLSMYLCILSALVPRGCLRLLTALVRHDRHPLTEVFEGVVPDEVTRIDLDQLSVPDDITRMRVMFSYLQSLSSIFNLGPRLHVYAYSAETLAASCWYSPR
Triplex capsid protein 2 C 305 Human Herpesvirus 8 MALDKSIVVNLTSRLFADELAALQSKIGSVLPLGDCHRLQNIQALGLGCVCSRETSPDYIQIMQYLSKCTLAVLEEVRPDSLRLTRMDPSDNLQIKNVYAPFFQWDSNTQLAVLPPLFSRKDSTIVLESNGFDIVFPMVVPQQLGHAILQQLLVYHIYSKISAGAPGDVNMAELDLYTTNVSFMGRTYRLDVDNTDPRTALRVLDDLSMYLCILSALVPRGCLRLLTALVRHDRHPLTEVFEGVVPDEVTRIDLDQLSVPDDITRMRVMFSYLQSLSSIFNLGPRLHVYAYSAETLAASCWYSPR
Triplex capsid protein 2 D 305 Human Herpesvirus 8 MALDKSIVVNLTSRLFADELAALQSKIGSVLPLGDCHRLQNIQALGLGCVCSRETSPDYIQIMQYLSKCTLAVLEEVRPDSLRLTRMDPSDNLQIKNVYAPFFQWDSNTQLAVLPPLFSRKDSTIVLESNGFDIVFPMVVPQQLGHAILQQLLVYHIYSKISAGAPGDVNMAELDLYTTNVSFMGRTYRLDVDNTDPRTALRVLDDLSMYLCILSALVPRGCLRLLTALVRHDRHPLTEVFEGVVPDEVTRIDLDQLSVPDDITRMRVMFSYLQSLSSIFNLGPRLHVYAYSAETLAASCWYSPR
Major capsid protein 4 1376 Human Herpesvirus 8 MEATLEQRPFPYLATEANLLTQIKESAADGLFKSFQLLLGKDAREGSVRFEALLGVYTNVVEFVKFLETALAAACVNTEFKDLRRMIDGKIQFKISMPTIAHGDGRRPNKQRQYIVMKACNKHHIGAEIELAAADIELLFAEKETPLDFTEYAGAIKTITSALQFGMDALERGLVDTVLAVKLRHAPPVFILKTLGDPVYSERGLKKAVKSDMVSMFKAHLIEHSFFLDKAELMTRGKQYVLTMLSDMLAAVCEDTVFKGVSTYTTASGQQVAGVLETTDSVMRRLMNLLGQVESAMSGPAAYASYVVRGANLVTAVSYGRAMRNFEQFMARIVDHPNALPSVEGDKAALADGHDEIQRTRIAASLVKIGDKFVAIESLQRMYNETQFPCPLNRRIQYTYFFPVGLHLPVPRYSTSVSVRGVESPAIQSTETWVVNKNNVPLCFGYQNALKSICHPRMHNPTQSAQALNQAFPDPDGGHGYGLRYEQTPNMNLFRTFHQYYMGKNVAFVPDVAQKALVTTEDLLHPTSHRLLRLEVHPFFDFFVHPCPGARGSYRATHRTMVGNIPQPLAPREFQESRGAQFDAVTNMTHVIDQLTIDVIQETAFDPAYPLFCYVIEAMIHGQEEKFVMNMPLIALVIQTYWVNSGKLAFVNSYHMVRFICTHMGNGSIPKEAHGHYRKILGELIALEQALLKLAGHETVGRTPITHLVSALLDPHLLPPFAYHDVFTDLMQKSSRQPIIKIGDQNYDNPQNRATFINLRGRMEDLVNNLVNIYQTRVNEDHDERHVLDVAPLDENDYNPVLEKLFYYVLMPVCSNGHMCGMGVDYQNVALTLTYNGPVFADVVNAQDDILLHLENGTLKDILQAGDIRPTVDMIRVLCTSFLTCPFVTQAARVITKRDPAQSFATHEYGKDVAQTVLVNGFGAFAVADRSREAAETMFYPVPFNKLYADPLVAATLHPLLANYVTRLPNQRNAVVFNVPSNLMAEYEEWHKSPVAAYAASCQATPGAISAMVSMHQKLSAPSFICQAKHRMHPGFAMTVVRTDEVLAEHILYCSRASTSMFVGLPSVVRREVRSDAVTFEITHEIASLHTALGYSSVIAPAHVAAITTDMGVHCQDLFMIFPGDAYQDRQLHDYIKMKAGVQTGPPGNRMDHVGYAAGVPRCENLPGLSHGQLATCEIIPTPVTSDVAYFQTPSNPRGRAACVVSCDAYSNESAERLLYDHSIPDPAYECRSTNNPWASQRGSLGDVLYNITFRQTALPGMYSPCRQFFHKEDIMRYNRGLYTLVNEYSARLAGAPATSTTDLQYVVVNGTDVFLDQPCHMLQEAYPTLAASHRVMLDEYMSNKQTHAPVHMGQYLIEEVAPMKRLLKLGNKVVY
Major capsid protein S 1376 Human Herpesvirus 8 MEATLEQRPFPYLATEANLLTQIKESAADGLFKSFQLLLGKDAREGSVRFEALLGVYTNVVEFVKFLETALAAACVNTEFKDLRRMIDGKIQFKISMPTIAHGDGRRPNKQRQYIVMKACNKHHIGAEIELAAADIELLFAEKETPLDFTEYAGAIKTITSALQFGMDALERGLVDTVLAVKLRHAPPVFILKTLGDPVYSERGLKKAVKSDMVSMFKAHLIEHSFFLDKAELMTRGKQYVLTMLSDMLAAVCEDTVFKGVSTYTTASGQQVAGVLETTDSVMRRLMNLLGQVESAMSGPAAYASYVVRGANLVTAVSYGRAMRNFEQFMARIVDHPNALPSVEGDKAALADGHDEIQRTRIAASLVKIGDKFVAIESLQRMYNETQFPCPLNRRIQYTYFFPVGLHLPVPRYSTSVSVRGVESPAIQSTETWVVNKNNVPLCFGYQNALKSICHPRMHNPTQSAQALNQAFPDPDGGHGYGLRYEQTPNMNLFRTFHQYYMGKNVAFVPDVAQKALVTTEDLLHPTSHRLLRLEVHPFFDFFVHPCPGARGSYRATHRTMVGNIPQPLAPREFQESRGAQFDAVTNMTHVIDQLTIDVIQETAFDPAYPLFCYVIEAMIHGQEEKFVMNMPLIALVIQTYWVNSGKLAFVNSYHMVRFICTHMGNGSIPKEAHGHYRKILGELIALEQALLKLAGHETVGRTPITHLVSALLDPHLLPPFAYHDVFTDLMQKSSRQPIIKIGDQNYDNPQNRATFINLRGRMEDLVNNLVNIYQTRVNEDHDERHVLDVAPLDENDYNPVLEKLFYYVLMPVCSNGHMCGMGVDYQNVALTLTYNGPVFADVVNAQDDILLHLENGTLKDILQAGDIRPTVDMIRVLCTSFLTCPFVTQAARVITKRDPAQSFATHEYGKDVAQTVLVNGFGAFAVADRSREAAETMFYPVPFNKLYADPLVAATLHPLLANYVTRLPNQRNAVVFNVPSNLMAEYEEWHKSPVAAYAASCQATPGAISAMVSMHQKLSAPSFICQAKHRMHPGFAMTVVRTDEVLAEHILYCSRASTSMFVGLPSVVRREVRSDAVTFEITHEIASLHTALGYSSVIAPAHVAAITTDMGVHCQDLFMIFPGDAYQDRQLHDYIKMKAGVQTGPPGNRMDHVGYAAGVPRCENLPGLSHGQLATCEIIPTPVTSDVAYFQTPSNPRGRAACVVSCDAYSNESAERLLYDHSIPDPAYECRSTNNPWASQRGSLGDVLYNITFRQTALPGMYSPCRQFFHKEDIMRYNRGLYTLVNEYSARLAGAPATSTTDLQYVVVNGTDVFLDQPCHMLQEAYPTLAASHRVMLDEYMSNKQTHAPVHMGQYLIEEVAPMKRLLKLGNKVVY
Major capsid protein T 1376 Human Herpesvirus 8 MEATLEQRPFPYLATEANLLTQIKESAADGLFKSFQLLLGKDAREGSVRFEALLGVYTNVVEFVKFLETALAAACVNTEFKDLRRMIDGKIQFKISMPTIAHGDGRRPNKQRQYIVMKACNKHHIGAEIELAAADIELLFAEKETPLDFTEYAGAIKTITSALQFGMDALERGLVDTVLAVKLRHAPPVFILKTLGDPVYSERGLKKAVKSDMVSMFKAHLIEHSFFLDKAELMTRGKQYVLTMLSDMLAAVCEDTVFKGVSTYTTASGQQVAGVLETTDSVMRRLMNLLGQVESAMSGPAAYASYVVRGANLVTAVSYGRAMRNFEQFMARIVDHPNALPSVEGDKAALADGHDEIQRTRIAASLVKIGDKFVAIESLQRMYNETQFPCPLNRRIQYTYFFPVGLHLPVPRYSTSVSVRGVESPAIQSTETWVVNKNNVPLCFGYQNALKSICHPRMHNPTQSAQALNQAFPDPDGGHGYGLRYEQTPNMNLFRTFHQYYMGKNVAFVPDVAQKALVTTEDLLHPTSHRLLRLEVHPFFDFFVHPCPGARGSYRATHRTMVGNIPQPLAPREFQESRGAQFDAVTNMTHVIDQLTIDVIQETAFDPAYPLFCYVIEAMIHGQEEKFVMNMPLIALVIQTYWVNSGKLAFVNSYHMVRFICTHMGNGSIPKEAHGHYRKILGELIALEQALLKLAGHETVGRTPITHLVSALLDPHLLPPFAYHDVFTDLMQKSSRQPIIKIGDQNYDNPQNRATFINLRGRMEDLVNNLVNIYQTRVNEDHDERHVLDVAPLDENDYNPVLEKLFYYVLMPVCSNGHMCGMGVDYQNVALTLTYNGPVFADVVNAQDDILLHLENGTLKDILQAGDIRPTVDMIRVLCTSFLTCPFVTQAARVITKRDPAQSFATHEYGKDVAQTVLVNGFGAFAVADRSREAAETMFYPVPFNKLYADPLVAATLHPLLANYVTRLPNQRNAVVFNVPSNLMAEYEEWHKSPVAAYAASCQATPGAISAMVSMHQKLSAPSFICQAKHRMHPGFAMTVVRTDEVLAEHILYCSRASTSMFVGLPSVVRREVRSDAVTFEITHEIASLHTALGYSSVIAPAHVAAITTDMGVHCQDLFMIFPGDAYQDRQLHDYIKMKAGVQTGPPGNRMDHVGYAAGVPRCENLPGLSHGQLATCEIIPTPVTSDVAYFQTPSNPRGRAACVVSCDAYSNESAERLLYDHSIPDPAYECRSTNNPWASQRGSLGDVLYNITFRQTALPGMYSPCRQFFHKEDIMRYNRGLYTLVNEYSARLAGAPATSTTDLQYVVVNGTDVFLDQPCHMLQEAYPTLAASHRVMLDEYMSNKQTHAPVHMGQYLIEEVAPMKRLLKLGNKVVY
Major capsid protein X 1376 Human Herpesvirus 8 MEATLEQRPFPYLATEANLLTQIKESAADGLFKSFQLLLGKDAREGSVRFEALLGVYTNVVEFVKFLETALAAACVNTEFKDLRRMIDGKIQFKISMPTIAHGDGRRPNKQRQYIVMKACNKHHIGAEIELAAADIELLFAEKETPLDFTEYAGAIKTITSALQFGMDALERGLVDTVLAVKLRHAPPVFILKTLGDPVYSERGLKKAVKSDMVSMFKAHLIEHSFFLDKAELMTRGKQYVLTMLSDMLAAVCEDTVFKGVSTYTTASGQQVAGVLETTDSVMRRLMNLLGQVESAMSGPAAYASYVVRGANLVTAVSYGRAMRNFEQFMARIVDHPNALPSVEGDKAALADGHDEIQRTRIAASLVKIGDKFVAIESLQRMYNETQFPCPLNRRIQYTYFFPVGLHLPVPRYSTSVSVRGVESPAIQSTETWVVNKNNVPLCFGYQNALKSICHPRMHNPTQSAQALNQAFPDPDGGHGYGLRYEQTPNMNLFRTFHQYYMGKNVAFVPDVAQKALVTTEDLLHPTSHRLLRLEVHPFFDFFVHPCPGARGSYRATHRTMVGNIPQPLAPREFQESRGAQFDAVTNMTHVIDQLTIDVIQETAFDPAYPLFCYVIEAMIHGQEEKFVMNMPLIALVIQTYWVNSGKLAFVNSYHMVRFICTHMGNGSIPKEAHGHYRKILGELIALEQALLKLAGHETVGRTPITHLVSALLDPHLLPPFAYHDVFTDLMQKSSRQPIIKIGDQNYDNPQNRATFINLRGRMEDLVNNLVNIYQTRVNEDHDERHVLDVAPLDENDYNPVLEKLFYYVLMPVCSNGHMCGMGVDYQNVALTLTYNGPVFADVVNAQDDILLHLENGTLKDILQAGDIRPTVDMIRVLCTSFLTCPFVTQAARVITKRDPAQSFATHEYGKDVAQTVLVNGFGAFAVADRSREAAETMFYPVPFNKLYADPLVAATLHPLLANYVTRLPNQRNAVVFNVPSNLMAEYEEWHKSPVAAYAASCQATPGAISAMVSMHQKLSAPSFICQAKHRMHPGFAMTVVRTDEVLAEHILYCSRASTSMFVGLPSVVRREVRSDAVTFEITHEIASLHTALGYSSVIAPAHVAAITTDMGVHCQDLFMIFPGDAYQDRQLHDYIKMKAGVQTGPPGNRMDHVGYAAGVPRCENLPGLSHGQLATCEIIPTPVTSDVAYFQTPSNPRGRAACVVSCDAYSNESAERLLYDHSIPDPAYECRSTNNPWASQRGSLGDVLYNITFRQTALPGMYSPCRQFFHKEDIMRYNRGLYTLVNEYSARLAGAPATSTTDLQYVVVNGTDVFLDQPCHMLQEAYPTLAASHRVMLDEYMSNKQTHAPVHMGQYLIEEVAPMKRLLKLGNKVVY
Major capsid protein W 1376 Human Herpesvirus 8 MEATLEQRPFPYLATEANLLTQIKESAADGLFKSFQLLLGKDAREGSVRFEALLGVYTNVVEFVKFLETALAAACVNTEFKDLRRMIDGKIQFKISMPTIAHGDGRRPNKQRQYIVMKACNKHHIGAEIELAAADIELLFAEKETPLDFTEYAGAIKTITSALQFGMDALERGLVDTVLAVKLRHAPPVFILKTLGDPVYSERGLKKAVKSDMVSMFKAHLIEHSFFLDKAELMTRGKQYVLTMLSDMLAAVCEDTVFKGVSTYTTASGQQVAGVLETTDSVMRRLMNLLGQVESAMSGPAAYASYVVRGANLVTAVSYGRAMRNFEQFMARIVDHPNALPSVEGDKAALADGHDEIQRTRIAASLVKIGDKFVAIESLQRMYNETQFPCPLNRRIQYTYFFPVGLHLPVPRYSTSVSVRGVESPAIQSTETWVVNKNNVPLCFGYQNALKSICHPRMHNPTQSAQALNQAFPDPDGGHGYGLRYEQTPNMNLFRTFHQYYMGKNVAFVPDVAQKALVTTEDLLHPTSHRLLRLEVHPFFDFFVHPCPGARGSYRATHRTMVGNIPQPLAPREFQESRGAQFDAVTNMTHVIDQLTIDVIQETAFDPAYPLFCYVIEAMIHGQEEKFVMNMPLIALVIQTYWVNSGKLAFVNSYHMVRFICTHMGNGSIPKEAHGHYRKILGELIALEQALLKLAGHETVGRTPITHLVSALLDPHLLPPFAYHDVFTDLMQKSSRQPIIKIGDQNYDNPQNRATFINLRGRMEDLVNNLVNIYQTRVNEDHDERHVLDVAPLDENDYNPVLEKLFYYVLMPVCSNGHMCGMGVDYQNVALTLTYNGPVFADVVNAQDDILLHLENGTLKDILQAGDIRPTVDMIRVLCTSFLTCPFVTQAARVITKRDPAQSFATHEYGKDVAQTVLVNGFGAFAVADRSREAAETMFYPVPFNKLYADPLVAATLHPLLANYVTRLPNQRNAVVFNVPSNLMAEYEEWHKSPVAAYAASCQATPGAISAMVSMHQKLSAPSFICQAKHRMHPGFAMTVVRTDEVLAEHILYCSRASTSMFVGLPSVVRREVRSDAVTFEITHEIASLHTALGYSSVIAPAHVAAITTDMGVHCQDLFMIFPGDAYQDRQLHDYIKMKAGVQTGPPGNRMDHVGYAAGVPRCENLPGLSHGQLATCEIIPTPVTSDVAYFQTPSNPRGRAACVVSCDAYSNESAERLLYDHSIPDPAYECRSTNNPWASQRGSLGDVLYNITFRQTALPGMYSPCRQFFHKEDIMRYNRGLYTLVNEYSARLAGAPATSTTDLQYVVVNGTDVFLDQPCHMLQEAYPTLAASHRVMLDEYMSNKQTHAPVHMGQYLIEEVAPMKRLLKLGNKVVY
Small capsomere-interacting protein A 170 Human Herpesvirus 8 MSNFKVRDPVIQERLDHDYAHHPLVARMNTLDQGNMSQAEYLVQKRHYLVFLIAHHYYEAYLRRMGGIQRRDHLQTLRDQKPRERADRVSAASAYDAGTFTVPSRPGPASGTTPGGQDSLGVSGSSITTLSSGPHSLSPASDILTTLSSTTETAAPAVADARKPPSGKKK
Small capsomere-interacting protein 2 170 Human Herpesvirus 8 MSNFKVRDPVIQERLDHDYAHHPLVARMNTLDQGNMSQAEYLVQKRHYLVFLIAHHYYEAYLRRMGGIQRRDHLQTLRDQKPRERADRVSAASAYDAGTFTVPSRPGPASGTTPGGQDSLGVSGSSITTLSSGPHSLSPASDILTTLSSTTETAAPAVADARKPPSGKKK
Small capsomere-interacting protein 3 170 Human Herpesvirus 8 MSNFKVRDPVIQERLDHDYAHHPLVARMNTLDQGNMSQAEYLVQKRHYLVFLIAHHYYEAYLRRMGGIQRRDHLQTLRDQKPRERADRVSAASAYDAGTFTVPSRPGPASGTTPGGQDSLGVSGSSITTLSSGPHSLSPASDILTTLSSTTETAAPAVADARKPPSGKKK
Small capsomere-interacting protein 1 170 Human Herpesvirus 8 MSNFKVRDPVIQERLDHDYAHHPLVARMNTLDQGNMSQAEYLVQKRHYLVFLIAHHYYEAYLRRMGGIQRRDHLQTLRDQKPRERADRVSAASAYDAGTFTVPSRPGPASGTTPGGQDSLGVSGSSITTLSSGPHSLSPASDILTTLSSTTETAAPAVADARKPPSGKKK
Small capsomere-interacting protein 0 170 Human Herpesvirus 8 MSNFKVRDPVIQERLDHDYAHHPLVARMNTLDQGNMSQAEYLVQKRHYLVFLIAHHYYEAYLRRMGGIQRRDHLQTLRDQKPRERADRVSAASAYDAGTFTVPSRPGPASGTTPGGQDSLGVSGSSITTLSSGPHSLSPASDILTTLSSTTETAAPAVADARKPPSGKKK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-07-06
Deposition Author(s): Bi, G.Q. , Dai, X. , Gong, D. , Jih, J. , Liu, Y.T. , Sun, R. , Zhou, Z.H.