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6PMD

Structure of clpp from staphylococcus aureus in complex with acyldepsipeptide

PDB DOI: 10.2210/pdb6pmd/pdb

Classification: HYDROLASE/ANTIBIOTIC
Organism(s): Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct

Deposited: 2019-07-01
Deposition Author(s): Griffith, E.C. , Lee, R.E.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.21 Å

6pmd
Literature

Structure of clpp from staphylococcus aureus in complex with acyldepsipeptide

Griffith, E.C. , Lee, R.E.

Primary Citation of Related Structures: 6PMD


Proteins
Molecule Chains Sequence Length Organism Sequence
ATP-dependent Clp protease proteolytic subunit A 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit B 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit C 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit D 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit E 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit F 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit G 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit I 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit K 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit L 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit M 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit N 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit S 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit T 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
SHV-WFP-SER-PRO-YCP-ALA-MP8 Acyldepsipeptide H 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
SHV-WFP-SER-PRO-YCP-ALA-MP8 Acyldepsipeptide J 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
SHV-WFP-SER-PRO-YCP-ALA-MP8 Acyldepsipeptide O 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
SHV-WFP-SER-PRO-YCP-ALA-MP8 Acyldepsipeptide P 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
SHV-WFP-SER-PRO-YCP-ALA-MP8 Acyldepsipeptide Q 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
SHV-WFP-SER-PRO-YCP-ALA-MP8 Acyldepsipeptide R 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
SHV-WFP-SER-PRO-YCP-ALA-MP8 Acyldepsipeptide U 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
SHV-WFP-SER-PRO-YCP-ALA-MP8 Acyldepsipeptide V 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
SHV-WFP-SER-PRO-YCP-ALA-MP8 Acyldepsipeptide X 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
SHV-WFP-SER-PRO-YCP-ALA-MP8 Acyldepsipeptide Y 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
SHV-WFP-SER-PRO-YCP-ALA-MP8 Acyldepsipeptide Z 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-07-01
Deposition Author(s): Griffith, E.C. , Lee, R.E.