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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6PIG

V. cholerae tniq-cascade complex, closed conformation

PDB DOI: 10.2210/pdb6pig/pdb

Classification: RNA BINDING PROTEIN/RNA
Organism(s): Vibrio Cholerae , Synthetic Construct

Deposited: 2019-06-26
Deposition Author(s): Halpin-Healy, T. , Klompe, S. , Sternberg, S.H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.5 Å

6pig
Literature

V. cholerae tniq-cascade complex, closed conformation

Halpin-Healy, T. , Klompe, S. , Sternberg, S.H.

Primary Citation of Related Structures: 6PIG


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (60-MER) 1 60 NA CUGAUAACUUACAGGACGCUUUGGCUUCAUUGCUUUUCAGGUGAACUGCCGAGUAGGUAG

Proteins
Molecule Chains Sequence Length Organism Sequence
cas7 type I-F CRISPR-associated protein Csy3 A 343 Vibrio Cholerae , Synthetic Construct KLPTNLAYERSIDPSDVCFFVVWPDDRKTPLTYNSRTLLGQMEAKSLAYDVSGQPIKSATAEALAQGNPHQVDFCHVPYGASHIECSFSVSFSSELRQPYKCNSSKVKQTLVQLVELYETKIGWTELATRYLMNICNGKWLWKNTRKAYCWNIVLTPWPWNGEKVGFEDIRTNYTSRQDFKNNKNWSAIVEMIKTAFSSTDGLAIFEVRATLHLPTNAMVRPSQVFTEKETQNSRVFQSTTIDGERSPILGAFKTGAAIATIDDWYPEATEPLRVGRFGVHREDVTCYRHPSTGKDFFSILQQAEHYIEVLSANKTPAQETINDMHFLMANLIKGGMFQHKGD
cas7 type I-F CRISPR-associated protein Csy3 B 343 Vibrio Cholerae , Synthetic Construct KLPTNLAYERSIDPSDVCFFVVWPDDRKTPLTYNSRTLLGQMEAKSLAYDVSGQPIKSATAEALAQGNPHQVDFCHVPYGASHIECSFSVSFSSELRQPYKCNSSKVKQTLVQLVELYETKIGWTELATRYLMNICNGKWLWKNTRKAYCWNIVLTPWPWNGEKVGFEDIRTNYTSRQDFKNNKNWSAIVEMIKTAFSSTDGLAIFEVRATLHLPTNAMVRPSQVFTEKETQNSRVFQSTTIDGERSPILGAFKTGAAIATIDDWYPEATEPLRVGRFGVHREDVTCYRHPSTGKDFFSILQQAEHYIEVLSANKTPAQETINDMHFLMANLIKGGMFQHKGD
cas7 type I-F CRISPR-associated protein Csy3 C 343 Vibrio Cholerae , Synthetic Construct KLPTNLAYERSIDPSDVCFFVVWPDDRKTPLTYNSRTLLGQMEAKSLAYDVSGQPIKSATAEALAQGNPHQVDFCHVPYGASHIECSFSVSFSSELRQPYKCNSSKVKQTLVQLVELYETKIGWTELATRYLMNICNGKWLWKNTRKAYCWNIVLTPWPWNGEKVGFEDIRTNYTSRQDFKNNKNWSAIVEMIKTAFSSTDGLAIFEVRATLHLPTNAMVRPSQVFTEKETQNSRVFQSTTIDGERSPILGAFKTGAAIATIDDWYPEATEPLRVGRFGVHREDVTCYRHPSTGKDFFSILQQAEHYIEVLSANKTPAQETINDMHFLMANLIKGGMFQHKGD
cas7 type I-F CRISPR-associated protein Csy3 D 343 Vibrio Cholerae , Synthetic Construct KLPTNLAYERSIDPSDVCFFVVWPDDRKTPLTYNSRTLLGQMEAKSLAYDVSGQPIKSATAEALAQGNPHQVDFCHVPYGASHIECSFSVSFSSELRQPYKCNSSKVKQTLVQLVELYETKIGWTELATRYLMNICNGKWLWKNTRKAYCWNIVLTPWPWNGEKVGFEDIRTNYTSRQDFKNNKNWSAIVEMIKTAFSSTDGLAIFEVRATLHLPTNAMVRPSQVFTEKETQNSRVFQSTTIDGERSPILGAFKTGAAIATIDDWYPEATEPLRVGRFGVHREDVTCYRHPSTGKDFFSILQQAEHYIEVLSANKTPAQETINDMHFLMANLIKGGMFQHKGD
cas7 type I-F CRISPR-associated protein Csy3 E 343 Vibrio Cholerae , Synthetic Construct KLPTNLAYERSIDPSDVCFFVVWPDDRKTPLTYNSRTLLGQMEAKSLAYDVSGQPIKSATAEALAQGNPHQVDFCHVPYGASHIECSFSVSFSSELRQPYKCNSSKVKQTLVQLVELYETKIGWTELATRYLMNICNGKWLWKNTRKAYCWNIVLTPWPWNGEKVGFEDIRTNYTSRQDFKNNKNWSAIVEMIKTAFSSTDGLAIFEVRATLHLPTNAMVRPSQVFTEKETQNSRVFQSTTIDGERSPILGAFKTGAAIATIDDWYPEATEPLRVGRFGVHREDVTCYRHPSTGKDFFSILQQAEHYIEVLSANKTPAQETINDMHFLMANLIKGGMFQHKGD
cas7 type I-F CRISPR-associated protein Csy3 F 343 Vibrio Cholerae , Synthetic Construct KLPTNLAYERSIDPSDVCFFVVWPDDRKTPLTYNSRTLLGQMEAKSLAYDVSGQPIKSATAEALAQGNPHQVDFCHVPYGASHIECSFSVSFSSELRQPYKCNSSKVKQTLVQLVELYETKIGWTELATRYLMNICNGKWLWKNTRKAYCWNIVLTPWPWNGEKVGFEDIRTNYTSRQDFKNNKNWSAIVEMIKTAFSSTDGLAIFEVRATLHLPTNAMVRPSQVFTEKETQNSRVFQSTTIDGERSPILGAFKTGAAIATIDDWYPEATEPLRVGRFGVHREDVTCYRHPSTGKDFFSILQQAEHYIEVLSANKTPAQETINDMHFLMANLIKGGMFQHKGD
cas5_8 naturally occurring fusion protein from Vibrio cholerae transposon Tn6677 G 511 Vibrio Cholerae , Synthetic Construct LKEIIASNPDDLTTELKRAFRPLTPHIAIDGNEIDALTILVNLTDKAKCKQKLRDEKWWASCINCVNYRQSHNPKFPDIRSEGVIRTQALGELPSFLLSSSKIPPYHWSYSHDSKYVNKSAFLTNEFCWDGEISCLGELLKDADHPLWNTLKKLGCSQKTCKAMAKQLADITLTTINVTLAPNYLTQISLPDSDTSYISLSPVASLSMQSHFHQRLQDENRHSAITRFSRTTNMGVTAMTCGGAFRMLKSGAKFSSPPHHRLNNGSFLVLPNIRVCGATALSSPVTVGIPSLTAFFGFVHAFERNINRTTSSFRVESFAICVHQLHVEKRGLTAEFVEKGDGTISAPATRDDWQCDVVFSLILNTNFAQHIDQDTLVTSLPKRLARGSAKIAIDDFKHINSFSTLETAIESLPIEAGRWLSLYAQSNNNLSDLLAAMTEDHQLMASCVGYHLLEEPKDKPNSLRGYKHAIAECIIGLINSITFSSETDPNTIFWSLKNYQNYLVVQPRSIN
type I-F CRISPR-associated endoribonuclease Cas6/Csy4 H 198 Vibrio Cholerae , Synthetic Construct KWYYKTITFLPELCNNESLAAKCLRVLHGFNYQYETRNIGVSFPLWCDATVGKKISFVSKNKIELDLLLKQHYFVQMEQLQYFHISNTVLVPEDCTYVSFRRCQSIDKLTAAGLARKIRRLEKRALSRGEAFDPSSFAQKEHTAIAHYHSLGESSKQTNRNFRLNIRMLSEQPREGNSIFSSYGLANSENSFQPVPLI
TniQ monomer 1 I 358 Vibrio Cholerae , Synthetic Construct AMFLQRPKPYSDESLESFFIRVANKNGYGDVHRFLEATKRFLQDIDHNGYQTFPTDITRINPYSAKNSSSARTASFLKLAQLTFNEPPELLGLAINRTNMKYSPSTSAVVRGAEVFPRSLLRTHSIPCCPLCLRENGYASYLWHFQGYEYCHSHNVPLITTCSGHEAACTVSNWLAGHESKPLPNLPKSYRWGLVHWWMGIKDSDHFSFVQFFSNWPRSFHSIIEDEVEFNLEHAVVSTSELRLKDLLGRLFFGSIRLPERNLQHNIILGELLCYLENRLWQDKGLIANLKMNALEATVMLNCSLDQIASMVEQRILKPNRKSKDVTDYLFHFGDIFCLWLAEFQSDEFNRSFYVSRW
TniQ monomer 2 J 369 Vibrio Cholerae , Synthetic Construct AMFLQRPKPYSDESLESFFIRVANKNGYGDVHRFLEATKRFLQDIDHNGYQTFPTDITRINPYSAKNSSSARTASFLKLAQLTFNEPPELLGLAINRTNMKYSPSTSAVVRGAEVFPRSLLRTHSIPCCPLCLRENGYASYLWHFQGYEYCHSHNVPLITTCSCGKEFDYRVSEAACTVSNWLAGHESKPLPNLPKSYRWGLVHWWMGIKDDHFSFVQFFSNWPRSFHSIIEDEVEFNLEHAVVSTSELRLKDLLGRLFFGSIRLPERNLQHNIILGELLCYLENRLWQDKGLIANLKMNALEATVMLNCSLDQIASMVEQRILKPNAAAAAAAAADVTDYLFHFGDIFCLWLAAFQSDEFNRSFYVSR
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-06-26
Deposition Author(s): Halpin-Healy, T. , Klompe, S. , Sternberg, S.H.