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6PCI

Ebov gpdmuc (makona) in complex with rebov-520 and rebov-548 fabs

PDB DOI: 10.2210/pdb6pci/pdb

Classification: immune system, viral protein
Organism(s): Ebola Virus , Homo Sapiens , Zaire Ebolavirus

Deposited: 2019-06-17
Deposition Author(s): Alkutkar, T. , Murin, C.D. , Ward, A.B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.12 Å

Literature

Ebov gpdmuc (makona) in complex with rebov-520 and rebov-548 fabs

Alkutkar, T. , Murin, C.D. , Ward, A.B.

Primary Citation of Related Structures: 6PCI


Proteins
Molecule Chains Sequence Length Organism Sequence
Virion spike glycoprotein A 278 Ebola Virus , Homo Sapiens , Zaire Ebolavirus SIPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSVTKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPQAKKDFFSSHPLREPVNATEDPSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYASGKRSNTTGKLIWKVNPEIDTTIGEWAFWETKKNLTRKIRSEELSFT
Virion spike glycoprotein B 278 Ebola Virus , Homo Sapiens , Zaire Ebolavirus SIPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSVTKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPQAKKDFFSSHPLREPVNATEDPSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYASGKRSNTTGKLIWKVNPEIDTTIGEWAFWETKKNLTRKIRSEELSFT
Virion spike glycoprotein C 278 Ebola Virus , Homo Sapiens , Zaire Ebolavirus SIPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSVTKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPQAKKDFFSSHPLREPVNATEDPSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYASGKRSNTTGKLIWKVNPEIDTTIGEWAFWETKKNLTRKIRSEELSFT
rEBOV-548 Fab heavy chain H 234 Ebola Virus , Homo Sapiens , Zaire Ebolavirus QVQVEESGGGVVQPGGSLRLSCAASGFMFSNYGMHWVRQAPGKGLEWMAFIRYDDSKKFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCAKELLQVYTSAWGEGHSYYYALDVWGLGTAVTVSSASFKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
rEBOV-548 Fab heavy chain I 234 Ebola Virus , Homo Sapiens , Zaire Ebolavirus QVQVEESGGGVVQPGGSLRLSCAASGFMFSNYGMHWVRQAPGKGLEWMAFIRYDDSKKFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCAKELLQVYTSAWGEGHSYYYALDVWGLGTAVTVSSASFKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
rEBOV-548 Fab heavy chain J 234 Ebola Virus , Homo Sapiens , Zaire Ebolavirus QVQVEESGGGVVQPGGSLRLSCAASGFMFSNYGMHWVRQAPGKGLEWMAFIRYDDSKKFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCAKELLQVYTSAWGEGHSYYYALDVWGLGTAVTVSSASFKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
rEBOV-548 Fab light chain K 214 Ebola Virus , Homo Sapiens , Zaire Ebolavirus DIQMTQSPSSVSASVGDRVTITCRASQDISNWLAWYQQKPGKAPELLIYTASILQSGVSSRFSGSGSGTDFTLTISSLQPEDSATYYCQQGKSFPYTFGQGTKLEIKRTAAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
rEBOV-548 Fab light chain L 214 Ebola Virus , Homo Sapiens , Zaire Ebolavirus DIQMTQSPSSVSASVGDRVTITCRASQDISNWLAWYQQKPGKAPELLIYTASILQSGVSSRFSGSGSGTDFTLTISSLQPEDSATYYCQQGKSFPYTFGQGTKLEIKRTAAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
rEBOV-548 Fab light chain M 214 Ebola Virus , Homo Sapiens , Zaire Ebolavirus DIQMTQSPSSVSASVGDRVTITCRASQDISNWLAWYQQKPGKAPELLIYTASILQSGVSSRFSGSGSGTDFTLTISSLQPEDSATYYCQQGKSFPYTFGQGTKLEIKRTAAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Virion spike glycoprotein,Virion spike glycoprotein,Ebola Virus (Makona) GP2 D 203 Ebola Virus , Homo Sapiens , Zaire Ebolavirus NNNTHHQDTGEESASSGKLGLITNTIAGVAGLITGGRRTRREVIVNAQPKCNPNLHFWTTQDEGAAIGLAWIPYFGPAAEGIYTEGLMHNQDGLICGLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGGTCHILGPDCCIEPHDWTKNITDKIDQIIHDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK
Virion spike glycoprotein,Virion spike glycoprotein,Ebola Virus (Makona) GP2 E 203 Ebola Virus , Homo Sapiens , Zaire Ebolavirus NNNTHHQDTGEESASSGKLGLITNTIAGVAGLITGGRRTRREVIVNAQPKCNPNLHFWTTQDEGAAIGLAWIPYFGPAAEGIYTEGLMHNQDGLICGLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGGTCHILGPDCCIEPHDWTKNITDKIDQIIHDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK
Virion spike glycoprotein,Virion spike glycoprotein,Ebola Virus (Makona) GP2 F 203 Ebola Virus , Homo Sapiens , Zaire Ebolavirus NNNTHHQDTGEESASSGKLGLITNTIAGVAGLITGGRRTRREVIVNAQPKCNPNLHFWTTQDEGAAIGLAWIPYFGPAAEGIYTEGLMHNQDGLICGLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGGTCHILGPDCCIEPHDWTKNITDKIDQIIHDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK
rEBOV-520 Fab light chain Q 215 Ebola Virus , Homo Sapiens , Zaire Ebolavirus EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYFAWYQQKPGQAPRLLISGTSTRAPGIPDRFSGSGSGTDFTLTISRLEPEDFAVYFCQQYGNSLYTFGQGTKLEIKRTAAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
rEBOV-520 Fab light chain R 215 Ebola Virus , Homo Sapiens , Zaire Ebolavirus EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYFAWYQQKPGQAPRLLISGTSTRAPGIPDRFSGSGSGTDFTLTISRLEPEDFAVYFCQQYGNSLYTFGQGTKLEIKRTAAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
rEBOV-520 Fab light chain S 215 Ebola Virus , Homo Sapiens , Zaire Ebolavirus EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYFAWYQQKPGQAPRLLISGTSTRAPGIPDRFSGSGSGTDFTLTISRLEPEDFAVYFCQQYGNSLYTFGQGTKLEIKRTAAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
rEBOV-520 Fab heavy chain N 227 Ebola Virus , Homo Sapiens , Zaire Ebolavirus QVQLQESGPGLGKPSETLSLSCTVSGASIRGYFWNWIRQPPGKGLEWIGYIHSTGSTNYNPSLKSRVTISVDTSKNQVSLNVNSVTAADTAVYFCARGAWNVATVYYYYGMDVWGQGTLVTVSSASFKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
rEBOV-520 Fab heavy chain O 227 Ebola Virus , Homo Sapiens , Zaire Ebolavirus QVQLQESGPGLGKPSETLSLSCTVSGASIRGYFWNWIRQPPGKGLEWIGYIHSTGSTNYNPSLKSRVTISVDTSKNQVSLNVNSVTAADTAVYFCARGAWNVATVYYYYGMDVWGQGTLVTVSSASFKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
rEBOV-520 Fab heavy chain P 227 Ebola Virus , Homo Sapiens , Zaire Ebolavirus QVQLQESGPGLGKPSETLSLSCTVSGASIRGYFWNWIRQPPGKGLEWIGYIHSTGSTNYNPSLKSRVTISVDTSKNQVSLNVNSVTAADTAVYFCARGAWNVATVYYYYGMDVWGQGTLVTVSSASFKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-06-17
Deposition Author(s): Alkutkar, T. , Murin, C.D. , Ward, A.B.