PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6P94

Human ape1 c65a ap-endonuclease product complex

PDB DOI: 10.2210/pdb6p94/pdb

Classification: LYASE/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2019-06-09
Deposition Author(s): Freudenthal, B.D. , Stark, W.J. , Whitaker, A.W.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.09 Å

6p94
Literature

Human ape1 c65a ap-endonuclease product complex

Freudenthal, B.D. , Stark, W.J. , Whitaker, A.W.

Primary Citation of Related Structures: 6P94


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA-(apurinic or apyrimidinic site) lyase A 276 Homo Sapiens , Synthetic Construct ALYEDPPDQKTSPSGKPATLKIASWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL
DNA-(apurinic or apyrimidinic site) lyase B 276 Homo Sapiens , Synthetic Construct ALYEDPPDQKTSPSGKPATLKIASWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*(3DR)P*CP*GP*AP*CP*GP*GP*AP*TP*CP*C)-3') d 11 NA NCGACGGATCC
DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3') p 10 NA GCTGATGCGC
DNA (5'-D(*GP*GP*AP*TP*CP*CP*GP*TP*CP*GP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') v 21 NA GGATCCGTCGGGCGCATCAGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-06-09
Deposition Author(s): Freudenthal, B.D. , Stark, W.J. , Whitaker, A.W.