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6P0E

Human dna ligase 1 (e346a,e592a) bound to adenylated dna containing an 8-oxo guanine:adenine base-pair

PDB DOI: 10.2210/pdb6p0e/pdb

Classification: LIGASE
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2019-05-16
Deposition Author(s): Riccio, A.A. , Schellenberg, M.J. , Tumbale, P.S. , Williams, R.S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.85 Å

Literature

Human dna ligase 1 (e346a,e592a) bound to adenylated dna containing an 8-oxo guanine:adenine base-pair

Riccio, A.A. , Schellenberg, M.J. , Tumbale, P.S. , Williams, R.S.

Primary Citation of Related Structures: 6P0E


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA ligase 1 A 645 Homo Sapiens , Synthetic Construct SNDPSGYNPAKNNYHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLYLSLNHLGPPQQGLALGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQADNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQ

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*TP*(8OG))-3') b 11 NA GCTGATGCGTG
DNA (5'-D(P*GP*TP*CP*GP*GP*AP*C)-3') c 7 NA GTCGGAC
DNA (5'-D(*GP*TP*CP*CP*GP*AP*CP*AP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') d 18 NA GTCCGACAACGCATCAGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-05-16
Deposition Author(s): Riccio, A.A. , Schellenberg, M.J. , Tumbale, P.S. , Williams, R.S.