PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6OZG

Crystal structure of thermotoga maritima (tm) endonuclease v (e89q) in complex with a 12mer dna containing an inosine followed by a ribo-adenosine

PDB DOI: 10.2210/pdb6ozg/pdb

Classification: HYDROLASE
Organism(s): Thermotoga Maritima , Synthetic Construct

Deposited: 2019-05-15
Deposition Author(s): Samara, N.L. , Yang, W.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.93 Å

Literature

Crystal structure of thermotoga maritima (tm) endonuclease v (e89q) in complex with a 12mer dna containing an inosine followed by a ribo-adenosine

Samara, N.L. , Yang, W.

Primary Citation of Related Structures: 6OZG


Proteins
Molecule Chains Sequence Length Organism Sequence
Endonuclease V A 224 Thermotoga Maritima , Synthetic Construct MDYRQLHRWDLPPEEAIKVQNELRKKIKLTPYEGEPEYVAGVDLSFPGKEEGLAVIVVLEYPSFKILEVVSERGEITFPYIPGLLAFRQGPLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKSRLYGTFKMPEDKRCSWSYLYDGEEIIGCVIRTKEGSAPIFVSPGHLMDVESSKRLIKAFTLPGRRIPEPTRLAHIYTQRLKKGL
Endonuclease V B 224 Thermotoga Maritima , Synthetic Construct MDYRQLHRWDLPPEEAIKVQNELRKKIKLTPYEGEPEYVAGVDLSFPGKEEGLAVIVVLEYPSFKILEVVSERGEITFPYIPGLLAFRQGPLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKSRLYGTFKMPEDKRCSWSYLYDGEEIIGCVIRTKEGSAPIFVSPGHLMDVESSKRLIKAFTLPGRRIPEPTRLAHIYTQRLKKGL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA/RNA (5'-D(*AP*AP*TP*GP*A)-R(P*A)-D(P*GP*AP*T)-R(P*NP*N)-D(P*T)-3') c 12 NA AATGAAGATNNT
DNA/RNA (5'-D(*AP*AP*TP*GP*A)-R(P*A)-D(P*GP*AP*T)-R(P*NP*N)-D(P*T)-3') d 12 NA AATGAAGATNNT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-05-15
Deposition Author(s): Samara, N.L. , Yang, W.