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FASTA Sequence PDB Format mmCIF Format
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6OYA

Structure of the rhodopsin-transducin-nanobody complex

PDB DOI: 10.2210/pdb6oya/pdb

Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Organism(s): Bos Taurus , Lama Glama

Deposited: 2019-05-14
Deposition Author(s): Cerione, R.A. , Erickson, J.W. , Gao, Y. , Hu, H. , Ramachandran, S. , Skiniotis, G.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.3 Å

Literature

Structure of the rhodopsin-transducin-nanobody complex

Cerione, R.A. , Erickson, J.W. , Gao, Y. , Hu, H. , Ramachandran, S. , Skiniotis, G.

Primary Citation of Related Structures: 6OYA


Proteins
Molecule Chains Sequence Length Organism Sequence
Gt-alpha/Gi1-alpha chimera A 359 Bos Taurus , Lama Glama MAHHHHHHAMGAGASAEEKHSRELEKKLKEDAEKDARTVKLLLLGAGESGKSTIVKQMKIIHQDGYSLEECLEFIAIIYGNTLQSILAIVRAMTTLNIQYGDSARQDDARKLMHMADTIEEGTMPKEMSDIIQRLWKDSGIQACFDRASEYQLNDSAGYYLSDLERLVTPGYVPTEQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRDERRKWIHCFEGVTAIIFCVALSDYDMVLVEDNQTNRMQESMNLFKSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTDYYPEYAGSNTYEEAGNYIKVQFLELNMASDVKEIYSHMTCATDTQNVKFVFDAVTDIIIKENLKDCGLF
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 B 340 Bos Taurus , Lama Glama MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
Guanine nucleotide-binding protein G(T) subunit gamma-T1 G 81 Bos Taurus , Lama Glama MPVINIEDPVINIEDLTEKDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVKGIPEDKNPFKELKGGCVIS
Camelid antibody VHH fragment N 138 Bos Taurus , Lama Glama QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLQWVSDISQSGASISYTGSVKGRFTISRDDAKNTLYLQMNSLKPADTAVYYCARCPAPFTRDCFDVTSTAYAYRGQGTQVTVSSHHHHHHEPEA
Rhodopsin R 348 Bos Taurus , Lama Glama MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-05-14
Deposition Author(s): Cerione, R.A. , Erickson, J.W. , Gao, Y. , Hu, H. , Ramachandran, S. , Skiniotis, G.