6OO2
Vps4 with cyclic peptide bound in the central pore
PDB DOI: 10.2210/pdb6oo2/pdb
Classification: TRANSPORT PROTEIN Organism(s): Saccharomyces Cerevisiae , Synthetic Construct
Deposited: 2019-04-22 Deposition Author(s): Dandey, V.P. , Fulcher, J.M. , Han, H. , Hill, C.P. , Kay, M.S. , Shen, P. , Sundquist, W.I.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 4.4 Å
Vps4 with cyclic peptide bound in the central pore
Dandey, V.P. , Fulcher, J.M. , Han, H. , Hill, C.P. , Kay, M.S. , Shen, P. , Sundquist, W.I.
Primary Citation of Related Structures: 6OO2
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Vacuolar protein sorting-associated protein 4 | A | 337 | Saccharomyces Cerevisiae , Synthetic Construct | QEEGEDNGGEDNKKLRGALSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFGQEGN |
| Vacuolar protein sorting-associated protein 4 | B | 337 | Saccharomyces Cerevisiae , Synthetic Construct | QEEGEDNGGEDNKKLRGALSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFGQEGN |
| Vacuolar protein sorting-associated protein 4 | C | 337 | Saccharomyces Cerevisiae , Synthetic Construct | QEEGEDNGGEDNKKLRGALSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFGQEGN |
| Vacuolar protein sorting-associated protein 4 | D | 337 | Saccharomyces Cerevisiae , Synthetic Construct | QEEGEDNGGEDNKKLRGALSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFGQEGN |
| Vacuolar protein sorting-associated protein 4 | E | 337 | Saccharomyces Cerevisiae , Synthetic Construct | QEEGEDNGGEDNKKLRGALSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFGQEGN |
| Vacuolar protein sorting-associated protein 4 | F | 337 | Saccharomyces Cerevisiae , Synthetic Construct | QEEGEDNGGEDNKKLRGALSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFGQEGN |
| Designed Cyclic Peptide | G | 30 | Saccharomyces Cerevisiae , Synthetic Construct | GGDEIVNKVLGGSSGGXXXXXXXXGGKGCK |
| Vacuolar protein sorting-associated protein VTA1 | H | 51 | Saccharomyces Cerevisiae , Synthetic Construct | TKDELTKIMDRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI |
| Vacuolar protein sorting-associated protein VTA1 | I | 51 | Saccharomyces Cerevisiae , Synthetic Construct | TKDELTKIMDRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI |
| Vacuolar protein sorting-associated protein VTA1 | J | 51 | Saccharomyces Cerevisiae , Synthetic Construct | TKDELTKIMDRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI |
| Vacuolar protein sorting-associated protein VTA1 | K | 51 | Saccharomyces Cerevisiae , Synthetic Construct | TKDELTKIMDRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI |
| Vacuolar protein sorting-associated protein VTA1 | L | 51 | Saccharomyces Cerevisiae , Synthetic Construct | TKDELTKIMDRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI |
| Vacuolar protein sorting-associated protein VTA1 | M | 51 | Saccharomyces Cerevisiae , Synthetic Construct | TKDELTKIMDRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI |
| Vacuolar protein sorting-associated protein VTA1 | N | 51 | Saccharomyces Cerevisiae , Synthetic Construct | TKDELTKIMDRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI |
| Vacuolar protein sorting-associated protein VTA1 | O | 51 | Saccharomyces Cerevisiae , Synthetic Construct | TKDELTKIMDRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI |
| Vacuolar protein sorting-associated protein VTA1 | P | 51 | Saccharomyces Cerevisiae , Synthetic Construct | TKDELTKIMDRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI |
| Vacuolar protein sorting-associated protein VTA1 | Q | 51 | Saccharomyces Cerevisiae , Synthetic Construct | TKDELTKIMDRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI |
| Vacuolar protein sorting-associated protein VTA1 | R | 51 | Saccharomyces Cerevisiae , Synthetic Construct | TKDELTKIMDRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI |
| Vacuolar protein sorting-associated protein VTA1 | S | 51 | Saccharomyces Cerevisiae , Synthetic Construct | TKDELTKIMDRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2019-04-22 Deposition Author(s): Dandey, V.P. , Fulcher, J.M. , Han, H. , Hill, C.P. , Kay, M.S. , Shen, P. , Sundquist, W.I.