6OFI
Crystal structure of the rv144 c1-c2 specific antibody ch55 fab in complex with hiv-1 clade a/e gp120
PDB DOI: 10.2210/pdb6ofi/pdb
Classification: IMMUNE SYSTEM Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1
Deposited: 2019-03-29 Deposition Author(s): Pazgier, M. , Tolbert, W.D. , Van, V. , Yan, F.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.85 Å
Crystal structure of the rv144 c1-c2 specific antibody ch55 fab in complex with hiv-1 clade a/e gp120
Pazgier, M. , Tolbert, W.D. , Van, V. , Yan, F.
Primary Citation of Related Structures: 6OFI
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| clade A/E 93TH057 HIV-1 gp120 core | G | 355 | Homo Sapiens , Human Immunodeficiency Virus 1 | VPVWKDADTTLFCASDAKAHETEVHNVWATHACVPTDPNPQEIHLENVTENFNMWKNNMVEQMQEDVISLWDQSLQPCVKLTGGSVIKQACPKISFDPIPIHYCTPAGYVILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTNNAKTIIVHLNKSVEINCTRPSNGGSGSGGDIRKAYCEINGTKWNKVLKQVTEKLKEHFNNKTIIFQPPSGGDLEITMHSFNCRGEFFYCNTTQLFNNTCIGNETMKGCNGTITLPCKIKQIINMWQGTGQAMYAPPIDGKINCVSNITGILLTRDGGANNTSNETFRPGGGNIKDNWRSELYKYKVVQIE |
| CH55 Fab heavy chain | H | 223 | Homo Sapiens , Human Immunodeficiency Virus 1 | QVQLVQSGAEVKKPGASVKVSCKASGYIFISYFMHWVRQAPGQGLEWMGIINPSSGDTRYAQKFQGRVTMTRDTSTNTVYMELSSLRSDDTAVYYCARRPGGLERHNWLDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK |
| CH55 Fab light chain | L | 215 | Homo Sapiens , Human Immunodeficiency Virus 1 | EIVMTQSPATLSVSPGERATLSCRASQSISSNLAWYQQKPGQAPRLLIYGASTRATGTPARFSGSGSGTEFTLTISSLQSEDFASYYCQQYNNWPAITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2019-03-29 Deposition Author(s): Pazgier, M. , Tolbert, W.D. , Van, V. , Yan, F.