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6OBJ

Structure of a dna-bound dimer extracted from filamentous sgrai endonuclease in its activated form

PDB DOI: 10.2210/pdb6obj/pdb

Classification: HYDROLASE/DNA
Organism(s): Dengue Virus 4 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2019-03-20
Deposition Author(s): Horton, N.C. , Lyumkis, D. , Polley, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.5 Å

6obj
Literature

Structure of a dna-bound dimer extracted from filamentous sgrai endonuclease in its activated form

Horton, N.C. , Lyumkis, D. , Polley, S.

Primary Citation of Related Structures: 6OBJ


Proteins
Molecule Chains Sequence Length Organism Sequence
SgraIR restriction enzyme A 339 Dengue Virus 4 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MPFTYSIEATRNLATTERCIQDIRNAPVRNRSTQFQLAQQNMLAYTFGEVIPGFASAGINGMDYRDVIGRPVENAVTEGTHFFRDDFRVDSNAKAKVAGDIFEIVSSAVMWNCAARWNSLMVGEGWRSQPRYSRPTLSPSPRRQVAVLNLPRSFDWVSLLVPESQEVIEEFRAGLRKDGLGLPTSTPDLAVVVLPEEFQNDEMWREEIAGLTRPNQILLSGAYQRLQGRVQPGEISLAVAFKRSLRSDRLYQPLYEANVMQLLLEGKLGAPKVEFEVHTLAPEGTNAFVTYEAASLYGLAEGRSAVHRAIRELYVPPTAADLARRFFAFLNERMELVNG
SgraIR restriction enzyme B 339 Dengue Virus 4 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MPFTYSIEATRNLATTERCIQDIRNAPVRNRSTQFQLAQQNMLAYTFGEVIPGFASAGINGMDYRDVIGRPVENAVTEGTHFFRDDFRVDSNAKAKVAGDIFEIVSSAVMWNCAARWNSLMVGEGWRSQPRYSRPTLSPSPRRQVAVLNLPRSFDWVSLLVPESQEVIEEFRAGLRKDGLGLPTSTPDLAVVVLPEEFQNDEMWREEIAGLTRPNQILLSGAYQRLQGRVQPGEISLAVAFKRSLRSDRLYQPLYEANVMQLLLEGKLGAPKVEFEVHTLAPEGTNAFVTYEAASLYGLAEGRSAVHRAIRELYVPPTAADLARRFFAFLNERMELVNG

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (26-MER) c 40 NA GATGCGTGGGTCTTCACACCGGTGTGAAGACCCACGCATC
DNA (26-MER) d 40 NA GATGCGTGGGTCTTCACACCGGTGTGAAGACCCACGCATC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-03-20
Deposition Author(s): Horton, N.C. , Lyumkis, D. , Polley, S.