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FASTA Sequence PDB Format mmCIF Format
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6O42

Crystal structure of the germline pgzl1 (pgzl1_gvmdmj) fab in complex with mper peptide epitope.

PDB DOI: 10.2210/pdb6o42/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2019-02-27
Deposition Author(s): Irimia, A. , Wilson, I.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.6 Å

6o42
Literature

Crystal structure of the germline pgzl1 (pgzl1_gvmdmj) fab in complex with mper peptide epitope.

Irimia, A. , Wilson, I.A.

Primary Citation of Related Structures: 6O42


Proteins
Molecule Chains Sequence Length Organism Sequence
PGZL1_gVmDmJ light chain L 215 Homo Sapiens , Synthetic Construct EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGTSQSTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
PGZL1_gVmDmJ light chain A 215 Homo Sapiens , Synthetic Construct EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGTSQSTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
PGZL1_gVmDmJ heavy chain H 227 Homo Sapiens , Synthetic Construct QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAREGEGWFGKPLRAFEFWGQGTVITVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
PGZL1_gVmDmJ heavy chain B 227 Homo Sapiens , Synthetic Construct QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAREGEGWFGKPLRAFEFWGQGTVITVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
MPER peptide, region 671-683 of HIV-1 gp41 G 16 Homo Sapiens , Synthetic Construct NWFDITNWLWYIKKKK
MPER peptide, region 671-683 of HIV-1 gp41 I 16 Homo Sapiens , Synthetic Construct NWFDITNWLWYIKKKK
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-02-27
Deposition Author(s): Irimia, A. , Wilson, I.A.