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FASTA Sequence PDB Format mmCIF Format
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6O41

Crystal structure of the unbound pgzl1 germline fab fragment (pgzl1_gvmdmj)

PDB DOI: 10.2210/pdb6o41/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Streptococcus Sp. Group G

Deposited: 2019-02-27
Deposition Author(s): Irimia, A. , Wilson, I.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.465 Å

6o41
Literature

Crystal structure of the unbound pgzl1 germline fab fragment (pgzl1_gvmdmj)

Irimia, A. , Wilson, I.A.

Primary Citation of Related Structures: 6O41


Proteins
Molecule Chains Sequence Length Organism Sequence
germline PGZL1_gVmDmJ light chain L 215 Homo Sapiens , Streptococcus Sp. Group G EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGTSQSTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
germline PGZL1_gVmDmJ light chain A 215 Homo Sapiens , Streptococcus Sp. Group G EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGTSQSTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
germline PGZL1_gVmDmJ light chain C 215 Homo Sapiens , Streptococcus Sp. Group G EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGTSQSTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
germline PGZL1_gVmDmJ heavy chain H 227 Homo Sapiens , Streptococcus Sp. Group G QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAREGEGWFGKPLRAFEFWGQGTVITVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
germline PGZL1_gVmDmJ heavy chain B 227 Homo Sapiens , Streptococcus Sp. Group G QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAREGEGWFGKPLRAFEFWGQGTVITVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
germline PGZL1_gVmDmJ heavy chain D 227 Homo Sapiens , Streptococcus Sp. Group G QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAREGEGWFGKPLRAFEFWGQGTVITVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
Immunoglobulin G-binding protein G (DOMAIN III) M 66 Homo Sapiens , Streptococcus Sp. Group G MTPAVTTYKLVINGKTLKGETTTKAVDAETAEKAFKQYANDNGVDGVWTYDDATKTFTVTEHHHHH
Immunoglobulin G-binding protein G (DOMAIN III) N 66 Homo Sapiens , Streptococcus Sp. Group G MTPAVTTYKLVINGKTLKGETTTKAVDAETAEKAFKQYANDNGVDGVWTYDDATKTFTVTEHHHHH
Immunoglobulin G-binding protein G (DOMAIN III) O 66 Homo Sapiens , Streptococcus Sp. Group G MTPAVTTYKLVINGKTLKGETTTKAVDAETAEKAFKQYANDNGVDGVWTYDDATKTFTVTEHHHHH
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-02-27
Deposition Author(s): Irimia, A. , Wilson, I.A.