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FASTA Sequence PDB Format mmCIF Format
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6NQD

Cryo-em structure of t/f100 sosip.664 hiv-1 env trimer in complex with 8anc195 fab

PDB DOI: 10.2210/pdb6nqd/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1

Deposited: 2019-01-21
Deposition Author(s): Fang, Q. , Rossmann, M.G.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.9 Å

6nqd
Literature

Cryo-em structure of t/f100 sosip.664 hiv-1 env trimer in complex with 8anc195 fab

Fang, Q. , Rossmann, M.G.

Primary Citation of Related Structures: 6NQD


Proteins
Molecule Chains Sequence Length Organism Sequence
T/F100 Env gp120 A 486 Homo Sapiens , Human Immunodeficiency Virus 1 ATNNLWVTVYYGVPVWRDADTTLFCASDAKAHETEVHNVWATHACVPTDPNPQEMHLKNVTENFNMWKNNMVEQMQEDVISLWDQSLKPCVKLTPLCVTLNCTSATVTNYTKVNDTSDIIGNITDDVRNCSFNMTTELRDKQQKVYALFYKLDIVPIDDSSNNGSSNFSEYRLINCNTSVIKQACPKVSFDPIPIHYCTPAGYAILRCNDKKFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEGIIIRSENLTNNAKTIIVHFNESVKINCTRPSNNTRTGIHIGPGQVFYKTGDIIGDIRKAYCNISGAQWHKVLGRVANKLKEHFNNKTIVFKPSSGGDPEITMHHFNCRGEFFYCNTTKLFNSTWGGNKNETRDNGTITIPCRIKQIINMWQGVGQAMYAPPIKGVIKCLSNITGILLTRDGGNDSTENNETFRPGGGNIKDNWRNELYKYKVVQIEPLGIAPTKCKRRVVERRRRRR
T/F100 Env gp120 E 486 Homo Sapiens , Human Immunodeficiency Virus 1 ATNNLWVTVYYGVPVWRDADTTLFCASDAKAHETEVHNVWATHACVPTDPNPQEMHLKNVTENFNMWKNNMVEQMQEDVISLWDQSLKPCVKLTPLCVTLNCTSATVTNYTKVNDTSDIIGNITDDVRNCSFNMTTELRDKQQKVYALFYKLDIVPIDDSSNNGSSNFSEYRLINCNTSVIKQACPKVSFDPIPIHYCTPAGYAILRCNDKKFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEGIIIRSENLTNNAKTIIVHFNESVKINCTRPSNNTRTGIHIGPGQVFYKTGDIIGDIRKAYCNISGAQWHKVLGRVANKLKEHFNNKTIVFKPSSGGDPEITMHHFNCRGEFFYCNTTKLFNSTWGGNKNETRDNGTITIPCRIKQIINMWQGVGQAMYAPPIKGVIKCLSNITGILLTRDGGNDSTENNETFRPGGGNIKDNWRNELYKYKVVQIEPLGIAPTKCKRRVVERRRRRR
T/F100 Env gp120 I 486 Homo Sapiens , Human Immunodeficiency Virus 1 ATNNLWVTVYYGVPVWRDADTTLFCASDAKAHETEVHNVWATHACVPTDPNPQEMHLKNVTENFNMWKNNMVEQMQEDVISLWDQSLKPCVKLTPLCVTLNCTSATVTNYTKVNDTSDIIGNITDDVRNCSFNMTTELRDKQQKVYALFYKLDIVPIDDSSNNGSSNFSEYRLINCNTSVIKQACPKVSFDPIPIHYCTPAGYAILRCNDKKFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEGIIIRSENLTNNAKTIIVHFNESVKINCTRPSNNTRTGIHIGPGQVFYKTGDIIGDIRKAYCNISGAQWHKVLGRVANKLKEHFNNKTIVFKPSSGGDPEITMHHFNCRGEFFYCNTTKLFNSTWGGNKNETRDNGTITIPCRIKQIINMWQGVGQAMYAPPIKGVIKCLSNITGILLTRDGGNDSTENNETFRPGGGNIKDNWRNELYKYKVVQIEPLGIAPTKCKRRVVERRRRRR
T/F100 Env gp41 B 184 Homo Sapiens , Human Immunodeficiency Virus 1 AVGLGAMIFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAPEAQQHLLQLTVWGIKQLQARVLAVERYLQDQKFLGLWGCSGKIICCTAVPWNSSWSNKTFEEIWNNMTWIEWEREISNYTSQIYDILTISQTQQEKNEKDLLELDAAAWSHPQFEKGGGSGGGSGGSAWSHPQFEK
T/F100 Env gp41 F 184 Homo Sapiens , Human Immunodeficiency Virus 1 AVGLGAMIFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAPEAQQHLLQLTVWGIKQLQARVLAVERYLQDQKFLGLWGCSGKIICCTAVPWNSSWSNKTFEEIWNNMTWIEWEREISNYTSQIYDILTISQTQQEKNEKDLLELDAAAWSHPQFEKGGGSGGGSGGSAWSHPQFEK
T/F100 Env gp41 J 184 Homo Sapiens , Human Immunodeficiency Virus 1 AVGLGAMIFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAPEAQQHLLQLTVWGIKQLQARVLAVERYLQDQKFLGLWGCSGKIICCTAVPWNSSWSNKTFEEIWNNMTWIEWEREISNYTSQIYDILTISQTQQEKNEKDLLELDAAAWSHPQFEKGGGSGGGSGGSAWSHPQFEK
8ANC195 G52K5 heavy chain, IG gamma-1 chain C 244 Homo Sapiens , Human Immunodeficiency Virus 1 QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
8ANC195 G52K5 heavy chain, IG gamma-1 chain G 244 Homo Sapiens , Human Immunodeficiency Virus 1 QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
8ANC195 G52K5 heavy chain, IG gamma-1 chain K 244 Homo Sapiens , Human Immunodeficiency Virus 1 QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
8ANC195 G52K5 light chain D 215 Homo Sapiens , Human Immunodeficiency Virus 1 DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
8ANC195 G52K5 light chain H 215 Homo Sapiens , Human Immunodeficiency Virus 1 DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
8ANC195 G52K5 light chain L 215 Homo Sapiens , Human Immunodeficiency Virus 1 DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-01-21
Deposition Author(s): Fang, Q. , Rossmann, M.G.