PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6NPR

Crystal structure of h-2dd with c84-c139 disulfide in complex with gp120 derived peptide p18-i10

PDB DOI: 10.2210/pdb6npr/pdb

Classification: IMMUNE SYSTEM
Organism(s): Salmonella Enterica , Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2019-01-18
Deposition Author(s): Mcshan, A.C. , Sgourakis, N.G. , Toor, J. , Tripathi, S.M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.37 Å

6npr
Literature

Crystal structure of h-2dd with c84-c139 disulfide in complex with gp120 derived peptide p18-i10

Mcshan, A.C. , Sgourakis, N.G. , Toor, J. , Tripathi, S.M.

Primary Citation of Related Structures: 6NPR


Proteins
Molecule Chains Sequence Length Organism Sequence
H-2 class I histocompatibility antigen, D-D alpha chain A 276 Salmonella Enterica , Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARWIEQEGPEYWERETRRAKGNEQSFRVDLRTALRCYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDGSDYIALNEDLKTWTAADMCAQITRRKWEQAGAAERDRAYLEGECVEWLRRYLKNGNATLLRTDPPKAHVTHHRRPEGDVTLRCWALGFYPADITLTWQLNGEELTQEMELVETRPAGDGTFQKWASVVVPLGKEQKYTCHVEHEGLPEPLTLRWGKE
H-2 class I histocompatibility antigen, D-D alpha chain C 276 Salmonella Enterica , Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARWIEQEGPEYWERETRRAKGNEQSFRVDLRTALRCYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDGSDYIALNEDLKTWTAADMCAQITRRKWEQAGAAERDRAYLEGECVEWLRRYLKNGNATLLRTDPPKAHVTHHRRPEGDVTLRCWALGFYPADITLTWQLNGEELTQEMELVETRPAGDGTFQKWASVVVPLGKEQKYTCHVEHEGLPEPLTLRWGKE
Beta-2-microglobulin B 100 Salmonella Enterica , Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
Beta-2-microglobulin D 100 Salmonella Enterica , Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
ARG-GLY-PRO-GLY-ARG-ALA-PHE-VAL-THR-ILE P 10 Salmonella Enterica , Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) RGPGRAFVTI
ARG-GLY-PRO-GLY-ARG-ALA-PHE-VAL-THR-ILE R 10 Salmonella Enterica , Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) RGPGRAFVTI
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-01-18
Deposition Author(s): Mcshan, A.C. , Sgourakis, N.G. , Toor, J. , Tripathi, S.M.