PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6NOD

Crystal structure of c. elegans puf-8 in complex with rna

PDB DOI: 10.2210/pdb6nod/pdb

Classification: rna binding protein/rna
Organism(s): Caenorhabditis Elegans , Synthetic Construct

Deposited: 2019-01-16
Deposition Author(s): Hall, T.M.T. , Mccann, K.L. , Qiu, C. , Wang, Y.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.547 Å

6nod
Literature

Crystal structure of c. elegans puf-8 in complex with rna

Hall, T.M.T. , Mccann, K.L. , Qiu, C. , Wang, Y.

Primary Citation of Related Structures: 6NOD


Proteins
Molecule Chains Sequence Length Organism Sequence
PUF (Pumilio/FBF) domain-containing A 356 Caenorhabditis Elegans , Synthetic Construct GTTTDDLLTRYRANPAMMKNLKLSDIRGALLKFAKDQVGSRFIQQELASSKDRFEKDSIFDEVVSNADELVDDIFGNYVVQKFFEYGEERHWARLVDAIIDRVPEYAFQMYACRVLQKALEKINEPLQIKILSQIRHVIHRCMKDQNGNHVVQKAIEKVSPQYVQFIVDTLLESSNTIYEMSVDPYGCRVVQRCLEHCSPSQTKPVIGQIHKRFDEIANNQYGNYVVQHVIEHGSEEDRMVIVTRVSNNLFEFATHKYSSNVIEKCLEQGAVYHKSMIVGAACHHQEGSVPIVVQMMKDQYANYVVQKMFDQVTSEQRRELILTVRPHIPVLRQFPHGKHILAKLEKYFQKPAVMS
PUF (Pumilio/FBF) domain-containing B 356 Caenorhabditis Elegans , Synthetic Construct GTTTDDLLTRYRANPAMMKNLKLSDIRGALLKFAKDQVGSRFIQQELASSKDRFEKDSIFDEVVSNADELVDDIFGNYVVQKFFEYGEERHWARLVDAIIDRVPEYAFQMYACRVLQKALEKINEPLQIKILSQIRHVIHRCMKDQNGNHVVQKAIEKVSPQYVQFIVDTLLESSNTIYEMSVDPYGCRVVQRCLEHCSPSQTKPVIGQIHKRFDEIANNQYGNYVVQHVIEHGSEEDRMVIVTRVSNNLFEFATHKYSSNVIEKCLEQGAVYHKSMIVGAACHHQEGSVPIVVQMMKDQYANYVVQKMFDQVTSEQRRELILTVRPHIPVLRQFPHGKHILAKLEKYFQKPAVMS
PUF (Pumilio/FBF) domain-containing C 356 Caenorhabditis Elegans , Synthetic Construct GTTTDDLLTRYRANPAMMKNLKLSDIRGALLKFAKDQVGSRFIQQELASSKDRFEKDSIFDEVVSNADELVDDIFGNYVVQKFFEYGEERHWARLVDAIIDRVPEYAFQMYACRVLQKALEKINEPLQIKILSQIRHVIHRCMKDQNGNHVVQKAIEKVSPQYVQFIVDTLLESSNTIYEMSVDPYGCRVVQRCLEHCSPSQTKPVIGQIHKRFDEIANNQYGNYVVQHVIEHGSEEDRMVIVTRVSNNLFEFATHKYSSNVIEKCLEQGAVYHKSMIVGAACHHQEGSVPIVVQMMKDQYANYVVQKMFDQVTSEQRRELILTVRPHIPVLRQFPHGKHILAKLEKYFQKPAVMS

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*UP*GP*UP*AP*UP*AP*UP*A)-3') d 8 NA UGUAUAUA
RNA (5'-R(P*UP*GP*UP*AP*UP*AP*UP*A)-3') e 8 NA UGUAUAUA
RNA (5'-R(P*UP*GP*UP*AP*UP*AP*UP*A)-3') f 8 NA UGUAUAUA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-01-16
Deposition Author(s): Hall, T.M.T. , Mccann, K.L. , Qiu, C. , Wang, Y.