6NF8
Structure of human mitochondrial translation initiation factor 3 bound to the small ribosomal subunit -class i
PDB DOI: 10.2210/pdb6nf8/pdb
Classification: RIBOSOMAL PROTEIN Organism(s): Parengyodontium Album , Salmonella Enterica
Deposited: 2018-12-19 Deposition Author(s): Agrawal, R. , Koripella, R. , Sharma, M.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.48 Å
Structure of human mitochondrial translation initiation factor 3 bound to the small ribosomal subunit -class i
Agrawal, R. , Koripella, R. , Sharma, M.
Primary Citation of Related Structures: 6NF8
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 28S ribosomal protein S22, mitochondrial | A | 359 | Parengyodontium Album , Salmonella Enterica | MATLRVSLSLWNLHAGSRGAGRVYFRARARPRPGDLFQPLPGVCGAGTPCRGLCSEAESGSPKIKKPTFMDEEVQSILIKMTGLDLLKIFKPAVQETKPPTYKLMTQAQLEEATRQAIEAAKVRLKMPPVLEERTPINDVLAEDKILEGTETGKYVFTDISYSIPHRERFIVVREPSGTLRKASWEERDRMIQIYFPKEGRRVLTPVIFREENLQTMYSQDRHVDVLNLCVAQFEPDSADYIKVHHQTYEDIDKYGKYDLLRSTRHFGGMAWYFVNKKKIDGLLIDQIQRDLVDDAASLVQLYHILHPDGQSAQEAKEQAAEGLQLIKVFAKTEAQKGAYIELTLQAYQEAFISSSAAS |
| 28S ribosomal protein S5, mitochondrial | E | 430 | Parengyodontium Album , Salmonella Enterica | MAAAVRAAGFLPALCGASAGRLWSRQLYLNTFPTASIWALKAVPSNGPSSSAGARGRCRSTHLGPALQTQCCTPAPGNVTAQQYRSYSFFTKLTADELWKGALAETGAGARKGRGKRTKRKRRKDLNRGQIIGEGRRGFLWPGLNAPLMKSGAIQTITQRSKEEQEKVEADMVQQREEWDRKRKMKVKRERGWSGNSWGGISLGPPDPGPNGETYDDFDTRILEVRNVFNMTAKEGRKRSVRVLVAVGNGRGAAGFAIGKATERADAFRKAKNRAVHYLHYIERYEDHTIYHDISLTFKRTHIKMKKQPRGYGLRCHRAITTICRLIGIKDMYAKVSGSVNMLSLTRGLFQGLSRQETHQQLADKKSLHVVEFREECGPLPIVVASPQGALRKDPEPEDEVPDIKLDWDDVKAVQGMKRSVWSGLKRAAT |
| 28S ribosomal protein S10, mitochondrial | J | 201 | Parengyodontium Album , Salmonella Enterica | MAVRAVFGALGRRLWQGSKNFSVSSSRSNIAKNDGFLLSTSMKWVQFSNLHVDVPKDLTKPTITISDEPDTLYKRLSVLVKGHDKAVLDSYEYFAVLAAKELGISVKVHEPPRKIERFTLLKSVHIFKKHRVQYEMRTLYRCLELEHLTGSTADVYLEYIQRNLPEGVAMEVTKTRLEQLPEHIKKPVWETTPEEKGDSKS |
| 28S ribosomal protein S16, mitochondrial | P | 135 | Parengyodontium Album , Salmonella Enterica | MVQLTTVLCKAYRGGHLTIRLALGGCTNRPFYRIVAAHNKCPRDGRFVEQLGSYDPMPNSHGEKLVALNLDRIRHWIGCGAHLSKPVEKLLGLSGFFPLHPMVITNAERLRRKRAQEVLLAAQKTDTEATETKEN |
| DAP3 protein | G | 351 | Parengyodontium Album , Salmonella Enterica | ISRTLENDPAKHGEQHVGQHYNISIQELKTVFPHGLPPRFVMQVKTFNEACLMVRKPALELLHYLKNTNFAHPAVRYVLYGEKGTGKTLSLCHIIHFCAKQDWLILHIPDAHLWVKNCRDLLQSTYNKQRFDQPLEASIWLKNFKTANERFLSQIKVQDKYIWNKRESTEKGSPLAEVVEQGIMRVRNATDAVGIVLKELKRQSSLGVFRLLVAVDGVNALWGRTTLKREDKSPITPEELALIYNLRKMVKNDWQGGAIVLTVSQTGSLFKPRKAYLPQELLGKEGFDTLDPFIPILVSNYNPKEFEGCIQYYLENNWLQHEKAHTEEGKKELLFLSNRNPGLLERLCAYL |
| 28S ribosomal protein S33, mitochondrial | I | 106 | Parengyodontium Album , Salmonella Enterica | MSSLSEYALRMSRLSARLFSEVARPTDSKSMKVVKLFSEQPLAKRKETYDWYPNHNTYFALMGILRSVGLYRDEHQDFKDEQLRLKKLRGKVKPRKGEGKRAAKKK |
| Aurora kinase A interacting protein 1 | N | 199 | Parengyodontium Album , Salmonella Enterica | MFLMRLTSQLLRAVPRAGCSGPWPVLGVLGRHACRPCYSTKPTGPSGVASLPGRRVHMELEEMLVPRKMSISPLESWLTIRYLLPRLDTGAPGTVSPAQLYECPPSRVGEGVEQGGKDVFDAPQMQCRNVLKIRRRKMNHHKYRKLVKRTRFLRRKVREARLKRKQMKFERDLRRIWQKAGLKEAPPGWQTPKIYLKGK |
| 28S ribosomal protein S31, mitochondrial | H | 386 | Parengyodontium Album , Salmonella Enterica | MFPRVSAVLPFRPLSRLPLCSAGPEASAATVVPLASPHGTVRTKCNIQRYFGTNSVIYSKKDDKSVPACEISKETENQGSTKENKKKDLVNIIKGMKVELSTVNVQTTKPPNRGQLKSLEAAIRRLQKSPEDAPQKSKSLSPELVAAATAVADSLPFDKQTTKSELLRQLRQHEEDSKAQKDGEKPKISFSNIISDMKVARSSTARASTRPVHQIQFDEGADDFVDREETADLRKRFRKNIFKGKRLNIFELKPVTEEAPETEAAPSLWDVEFAKQLAAVTEQPFQNGFEEMIQWTKEGKLWEFPINNEAGFDDDGSEFHEHIFLDKYLEGFPKQGPIRHFMELVTCGLSKNPYLSVKQKVEHIEWFRNYFNEKQDILKESGINFS |
| 28S ribosomal protein S25, mitochondrial | C | 173 | Parengyodontium Album , Salmonella Enterica | MPMKGRFPIRRTLQYLSQGDVVFKDSVKVMTVNYNTHGELGEGARKFVFFNIPQIQYKNPWVQIMLFKNMTPTPFLRFYLDSGEQVLVDVETKSNKEIMEHVKKILGKNEETLRRERQEREQLSHPAHFGPRKYCLRECICEVEGQVPCPAVVPLPRELTGKFQAALRAGAQD |
| 28S ribosomal protein S11, mitochondrial | K | 197 | Parengyodontium Album , Salmonella Enterica | MQVLRNSGSWLLRSWAWPPTTRVVAGVPAPTIHMSAQQMQDAAAKEEVEKAETPAPAPSRSSFSIYPPIPGQESSLRWAGKKFEEIPIAHIKASYNNTQIHVVSAAHQPLARASCGTEGFRNAKKGTGIAAQTAGIAAAAKATGKGVTHVRVVVKGLGPGRLSAIKGLTMGGLEVISITDNTPIPHNGCRPRKARRL |
| Coiled-coil-helix-coiled-coil-helix domain containing 1 | M | 118 | Parengyodontium Album , Salmonella Enterica | MATPSLRGRLARLGNPRKPILKPNKPLILANHVGERRREKGEATCITEMSIMMACWKQNEFRDEACKKEIRDFFDCASRAEAARKMRSIQEDLGELGSLPPRKLNKLLQRFPNKPHLS |
| 28S ribosomal protein S15, mitochondrial | O | 256 | Parengyodontium Album , Salmonella Enterica | MLRAAWRALSSIRTQAVTQPPVLGLPGGGCAKLLSVQRDLPSSLILQAARGYATQKPVQQSQEDDPPPSMLLKDYQNVPGIEKVDDVVKRLISLEMANKKEMLKIKKEQLMSKVVENPKDTSSLEAQIVALTVKIRSYEEHMQKHQKDKAHKRYLLMSIDKRQKMLKNLRKTNYPVFEKTCKELGIEYTFPPPYHRKIHRRLATKKALCIRVFQEVQKLKKQKRALKTAAAAAQKQGQRNPESPSEARSEAIKETQ |
| 28S ribosomal protein S23, mitochondrial | B | 190 | Parengyodontium Album , Salmonella Enterica | MAGSRLETVGSIFTRTRDLIRAGVLKEKPLWFDVYNAFPPLREPVFRRPRLRYGKAKSPTQDIYYHEDQIRAKFYAAYGSGPKAFDLFNPNFKSTCQRFVEKYIELQKLGETDEEKLFVEAGKALLAEGVILRRVEKARTQQEGSQVSRKSESMGVESQTALEENPPLKEVPQAQHLESPGEESKGLSPP |
| 28S ribosomal protein S28, mitochondrial | F | 189 | Parengyodontium Album , Salmonella Enterica | MAALCRTRAVTAESHFLRVFLFSRSCRGAGTESGSGSESSNSTEPRPRPGGFASALERHSELQRKAELARTRGSPKNVESFASMLRHSPLTQMGPAKDKIVIGRIFHIVENDLYIDFGGKFHCVCKRPEVDGEKYQKGTRVRLRLLDLELTSRFLGATTDTTILEAEAVLLGLQESKDSKSKEERRENK |
| 28S ribosomal protein S18c, mitochondrial | R | 143 | Parengyodontium Album , Salmonella Enterica | MAAVLGLCGGLGKRKFTRFPTAFVCLTNSGTRAVLWRSCSQCKQVTSSEDLPIPMENPYKEPLKKCILCEKRVDYKNVQLLSQFISPFTGCIYGRHITGLCGKKQREITKAIKRAQILGFMPVTYKDPAYLKDPKVCNIRYRE |
| 28S ribosomal protein S21, mitochondrial | U | 87 | Parengyodontium Album , Salmonella Enterica | MAKHLKFIARTVMVQEGNVEGAYRTLNRILTMDGLIEDIKRRRYYEKPCRRRQRESYETCRRIYNMEMARKINFLMRKNRADPWQGC |
| Translation initiation factor IF-3, mitochondrial | Z | 247 | Parengyodontium Album , Salmonella Enterica | TAPAQLSPIASAPRLSFLIHAKAFSTAEDTQNEGKKTKKNKTAFSNVGRKISQRVIHLFDEKGNDLGNMHRANVIRLMDERDLRLVQRNTSTEPAEYQLMTGLQILQERQRLREMEKANPKTGPTLRKELILSSNIGQHDLDTKTKQIQQWIKKKHLVQITIKKGKNVDVSENEMEEIFHQILQTMPGIATFSSRPQAVQGGKALMCVLRAFSKNEEKAYKETQETQERDTLNKDHGNDKESNVLHQ |
| 28S ribosomal protein S12, mitochondrial | L | 139 | Parengyodontium Album , Salmonella Enterica | MSWSGLLRGLSMSLNYGLALAPRPWGTRPMATLNQLHRRGPPKFPPSKPGPTEGRPQLKGVVLRTFIRKPKKPNSANRKCCRVRLSTGREAVCFIPGEGHNLQEHHVVLVQGGRTQDLPGVKLKVVRGKYDCGHVQKKK |
| 28S ribosomal protein S17, mitochondrial | Q | 130 | Parengyodontium Album , Salmonella Enterica | MSVVRSSVHAKWIVGKVIGTAMQKTAKVRVTRLVLDPYLLKYFNKRKTYFAHDALQQCTVGDIVLLKALPVPRTKHVKHELAEIVFKVGQVVDPVTGKRCAGTTYLESPVDLETTPLAKNLEELSLSTTQ |
| 28S ribosomal protein S26, mitochondrial | D | 205 | Parengyodontium Album , Salmonella Enterica | MLRALSTLGARPLGRPPAQFLLLARGRKTRHDPPAKSKIGRVATPPAVDPAEFFVLTERYRQYRQTVRALRQEFVTEVRRKVHEARAGVLAERKALQDAAEHRELMAWNQAENQRLHELRMARLRQEAREQEQWQAEEAAREAREAEAWARLKEQEVLQLQEDAKNFITRENLEARVEEALDSPKSYNWAVTREGQVVTPQHKGS |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2018-12-19 Deposition Author(s): Agrawal, R. , Koripella, R. , Sharma, M.