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6NBF
Cryo-em structure of parathyroid hormone receptor type 1 in complex with a long-acting parathyroid hormone analog and g protein
PDB DOI: 10.2210/pdb6nbf/pdb
Classification: SIGNALING PROTEIN Organism(s): Parengyodontium Album , Salmonella Enterica , Pandinus Imperator , Fremyella Diplosiphon , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2018-12-07 Deposition Author(s): Clark, L.J. , De Waal, P.P. , Gardella, T.J. , Jean-Alphonse, F.G. , Jiang, Y. , Kang, Y. , Li, C.-Y. , Ma, S. , Melcher, K. , Shen, D.-D. , Sutkeviciute, I. , Vilardaga, J.-P. , Wang, M.-W. , Watanabe, T. , White, A.D. , Xiao, K. , Xu, H.E. , Yang, D. , Zhang, Y. , Zhao, L.-H. , Zhou, X.E.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.0 Å
Cryo-em structure of parathyroid hormone receptor type 1 in complex with a long-acting parathyroid hormone analog and g protein
Clark, L.J. , De Waal, P.P. , Gardella, T.J. , Jean-Alphonse, F.G. , Jiang, Y. , Kang, Y. , Li, C.-Y. , Ma, S. , Melcher, K. , Shen, D.-D. , Sutkeviciute, I. , Vilardaga, J.-P. , Wang, M.-W. , Watanabe, T. , White, A.D. , Xiao, K. , Xu, H.E. , Yang, D. , Zhang, Y. , Zhao, L.-H. , Zhou, X.E.
Primary Citation of Related Structures: 6NBF
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Parathyroid hormone/parathyroid hormone-related peptide receptor | R | 478 | Parengyodontium Album , Salmonella Enterica , Pandinus Imperator , Fremyella Diplosiphon , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | DADDVMTKEEQIFLLHRAQAQCEKRLKEVLQRPASIMESDKGWTSASTSGKPRKDKASGKLYPESEEDKEAPTGSRYRGRPCLPEWDHILCWPLGAPGEVVAVPCPDYIYDFNHKGHAYRRCDRNGSWELVPGHNRTWANYSECVKFLTNETREREVFDRLAMIYTVGYSVSLASLTVAVLILAYFRRLHCTRNYIHMHLFLSFMLRAVSIFVKDAVLYSGATLDEAERLTEEELRAIAQAPPPPATAAAGYAGCRVAVTFFLYFLATNYYWILVEGLYLHSLIFMAFFSEKKYLWGFTVFGWGLPAVFVAVWVSVRATLANTGCWDLSSGNKKWIIQVPILASIVLNFILFINIVRVLATKLRETNAGRCDTRQQYRKLLKSTLVLMPLFGVHYIVFMATPYTEVSGTLWQVQMHYEMLFNSFQGFFVAIIYCFCNGEVQAEIKKSWSRWTLALDFKRKARSGSSSYSYGPMVSHEF |
| Long-acting parathyroid hormone analog | P | 36 | Parengyodontium Album , Salmonella Enterica , Pandinus Imperator , Fremyella Diplosiphon , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | AVAEIQLMHQRAKWIQDARRRAFLHKLIAEIHTAEI |
| Gs protein alpha subunit | A | 378 | Parengyodontium Album , Salmonella Enterica , Pandinus Imperator , Fremyella Diplosiphon , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGYSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDSARADDARQLFVLAGAAEEGFMTAELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLNDLDRIAQPNYIPTQQDVLRTRVKTTGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL |
| Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 | B | 345 | Parengyodontium Album , Salmonella Enterica , Pandinus Imperator , Fremyella Diplosiphon , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MGSLLQSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN |
| Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 | G | 71 | Parengyodontium Album , Salmonella Enterica , Pandinus Imperator , Fremyella Diplosiphon , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MASNNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFREKKFFCAIL |
| Nanobody-35 | N | 126 | Parengyodontium Album , Salmonella Enterica , Pandinus Imperator , Fremyella Diplosiphon , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2018-12-07 Deposition Author(s): Clark, L.J. , De Waal, P.P. , Gardella, T.J. , Jean-Alphonse, F.G. , Jiang, Y. , Kang, Y. , Li, C.-Y. , Ma, S. , Melcher, K. , Shen, D.-D. , Sutkeviciute, I. , Vilardaga, J.-P. , Wang, M.-W. , Watanabe, T. , White, A.D. , Xiao, K. , Xu, H.E. , Yang, D. , Zhang, Y. , Zhao, L.-H. , Zhou, X.E.