Cryo-em structure of csm-crrna binary complex in type iii-a crispr-cas system
PDB DOI: 10.2210/pdb6muu/pdb
Classification: RNA BINDING PROTEIN/RNA Organism(s): Thermoanaerobacterium Xylanolyticum (Strain Atcc 49914 / Dsm 7097 / Lx-11) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2018-10-23 Deposition Author(s): Eng, E.T. , Jia, N. , Patel, D.J. , Wang, C.
Method: ELECTRON MICROSCOPY Resolution: 3.0 Å
Cryo-em structure of csm-crrna binary complex in type iii-a crispr-cas system
Eng, E.T. , Jia, N. , Patel, D.J. , Wang, C.
Primary Citation of Related Structures: 6MUU
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Uncharacterized protein Csm1 | A | 791 | Thermoanaerobacterium Xylanolyticum (Strain Atcc 49914 / Dsm 7097 / Lx-11) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MGSSHHHHHHSQDPMEIDELTALGGLLHDIGKPVQRAGLYSGDHSTQGARFLRDLAENTGRAEYELLSLFSEFHHKGHMKNDELMIRRIKELSPERFGLTMEDVLNALWIVYEADNLASGEREEGQPQASRPLYSVFNPGKAYPWAELDFEKELPVPGDVFSIRSQDYRELVKRLWEELSKAKLRSDRLLPVLEKYLTFVSSVTSEGNIISLYDHMRMTSAIALAMLRAGCTAEDVRSGRCRKEKRFLLIEGDFSGIQDFIYRVSGKGTLKYLRARSAYLELIGWDVVLEILSRLGLTRANVVFNAGGHFMIIAQNTPDAVKELEEIRAKAVEWLYREFESDLYLAIEWEPVSGREFGREGGKNLFAEARKRLKHKLTVRKLKRFGEIKGLFEHGHTERLAECPVCGRELPEGKLEPSASDPETKVCPTCNRLVSLGGNLPKLLGFGRTAKNDAGVLVEGPFSGFVPYLQGGRPVGEQILVKNTLNPGEIPESAQFVPYFVADYFKKDPKGGVATFEELSMASTGTRRLGVMKGDVDRLGEFFSSMDSPSKLATASRFMDYFFKGYIGAIIEGKFGYIIGDVPSLRDWPEEPDIVVVYAGGDDFFIVGAWDQIFELAFRVRRAFNAYTGGKLTLSVGLGYFDERTPIYRMADVVSERLDTAKDEGRNRVFVVGRSRPLDGKHKLSYEWNHYEELWRTYAPRIYAGNGRLKGKLESKKGLLWKLLEIRELYVRDPNDVRWAYLTAYLLGRHGLSDLFPELVGIDTKAVERKEPQPVYWVDGVLKIVLMAVRR |
Uncharacterized protein Csm2 | B | 187 | Thermoanaerobacterium Xylanolyticum (Strain Atcc 49914 / Dsm 7097 / Lx-11) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | SMAYHQKHGGYGRGGYGRQDRPQVDASRLFGESPDVVGIKKMLEGKGKQWEAIQPYFDNVVREAKNFLEWSPNKRLANAVTVAAYLTSQGLKTNQVRKILDMARTTELKVKRGEGDIKDDLVKMRYLLAYTVGKATGQSKYSLDAFHRILDPMLEVLMGSPKKENFEKFYDFLQAVVAYHKFFGGGD |
Uncharacterized protein Csm3 | C | 291 | Thermoanaerobacterium Xylanolyticum (Strain Atcc 49914 / Dsm 7097 / Lx-11) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | SMDRRFYGKIVIKGKIKAVTGLHIGSQRDISEIGGIDNPVIKDPHTGLPYIPGSSLKGRLRSLFEILVNSRLGEWREKYPSLANYSPGSCRPDNQENCGKFFNRKINRGWIHVCPDYETALACPVCRLFGASGKESNFPSRIIVRDAFLTKEWEEKWRAGEAITEAKIEVGIDRVTSQANPRTNERVVAGAEFEFEIIYNVENTTHWRDDIKNLLTAMALLEDSYLGGSGSRGYGKVKFIFDSFEFRPLDYYRTGKDEDIVSIDAREKSVSDILSGFDSLFSEVEGKLEAG |
Uncharacterized protein Csm3 | D | 291 | Thermoanaerobacterium Xylanolyticum (Strain Atcc 49914 / Dsm 7097 / Lx-11) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | SMDRRFYGKIVIKGKIKAVTGLHIGSQRDISEIGGIDNPVIKDPHTGLPYIPGSSLKGRLRSLFEILVNSRLGEWREKYPSLANYSPGSCRPDNQENCGKFFNRKINRGWIHVCPDYETALACPVCRLFGASGKESNFPSRIIVRDAFLTKEWEEKWRAGEAITEAKIEVGIDRVTSQANPRTNERVVAGAEFEFEIIYNVENTTHWRDDIKNLLTAMALLEDSYLGGSGSRGYGKVKFIFDSFEFRPLDYYRTGKDEDIVSIDAREKSVSDILSGFDSLFSEVEGKLEAG |
Uncharacterized protein Csm4 | E | 289 | Thermoanaerobacterium Xylanolyticum (Strain Atcc 49914 / Dsm 7097 / Lx-11) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MPKFIAVKLIPKGPFRDIPRADTLFGAIGNAISAIHGQSAVEELVDAFVGGARISSAFPYSGDTYYLPKPLSVEPALEGILTGLDEEERYTTAKRLRKAKYLDLKNFELALRLRPFTIPEEIPYARVDVPRVVLDRVTQDSSIYFWEEIRFREKSGVYFLYSGPREVFDGYIAPAMRFLGDTGIGGKSTWGAGLFEVEFHEMKIDAPGSEYSVTLSNALPTKTPVLWRLLRKGGWSFGRRKPRMTFIAEGSIVKNDPGGMERLELGLSHEVYVYGLTFPLGVELPEGLE |
Uncharacterized protein Csm5 | F | 403 | Thermoanaerobacterium Xylanolyticum (Strain Atcc 49914 / Dsm 7097 / Lx-11) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MTERTLKVLSPLHIGTGNELTPVDIYPRENIIHVLDTERLVNDLMNLGVELNEILALLKNPPGDAYIWKGYIEEFHLDPSDYSIYTLKIHGKIGRKSMQIKEFIKLNGRPYIPGSSLKGAIRTAVLYKALKECGDARAVMRVVSKVNGDVARDIGRSEDVLDYYMSFLSRARIDRKRADDLLEAIVFGMEPDRRSKIRYEPKRDPMKALIVRDSKPVGRKHLAVYHVEVIGNPQPIPIWVEAIEPGAATDVEIHVDTEALRLNADYFNGLLWECLKERGEPGEVFEDFLWEAVDEFYTAVMKYETIEVQKFGRYTSQVRSFYASLEDHSGHVLRLGWGSGWLAMTIGLLLVEKGYKWENVRKKLGLGKKPGGSGFSREFPKTRRLADGMPMGWVVLEHHHHHH |
Nucleic Acids / Hybrid | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
RNA (25-MER) | g | 38 | NA | GUGGAAAGGCGGGCAGAGGCGGUUUGCGUAUUGGGCGC |
Method: ELECTRON MICROSCOPY
Deposited Date: 2018-10-23 Deposition Author(s): Eng, E.T. , Jia, N. , Patel, D.J. , Wang, C.