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FASTA Sequence PDB Format mmCIF Format
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6MTI

Synaptotagmin-1 c2a, c2b domains and snare-pin proteins (5cci) individually docked into cryo-em map of c2ab-snare complexes helically organized on lipid nanotube surface in presence of mg2+

PDB DOI: 10.2210/pdb6mti/pdb

Classification: EXOCYTOSIS
Organism(s): Rattus Norvegicus

Deposited: 2018-10-19
Deposition Author(s): Coleman, J. , Grushin, K. , Krishnakumar, S. , Rothman, J. , Sindelar, C. , Wang, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 10.4 Å

6mti
Literature

Synaptotagmin-1 c2a, c2b domains and snare-pin proteins (5cci) individually docked into cryo-em map of c2ab-snare complexes helically organized on lipid nanotube surface in presence of mg2+

Coleman, J. , Grushin, K. , Krishnakumar, S. , Rothman, J. , Sindelar, C. , Wang, J.

Primary Citation of Related Structures: 6MTI


Proteins
Molecule Chains Sequence Length Organism Sequence
Synaptotagmin-1 1 127 Rattus Norvegicus KLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEK
Synaptotagmin-1 6 127 Rattus Norvegicus KLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEK
Synaptotagmin-1 2 281 Rattus Norvegicus KLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEEEVDAMLAVKK
Synaptotagmin-1 3 281 Rattus Norvegicus KLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEEEVDAMLAVKK
Synaptotagmin-1 4 281 Rattus Norvegicus KLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEEEVDAMLAVKK
Synaptotagmin-1 5 281 Rattus Norvegicus KLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEEEVDAMLAVKK
Vesicle-associated membrane protein 2 A 63 Rattus Norvegicus GSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYW
Vesicle-associated membrane protein 2 E 63 Rattus Norvegicus GSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYW
Vesicle-associated membrane protein 2 I 63 Rattus Norvegicus GSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYW
Vesicle-associated membrane protein 2 M 63 Rattus Norvegicus GSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYW
Vesicle-associated membrane protein 2 Q 63 Rattus Norvegicus GSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYW
Vesicle-associated membrane protein 2 U 63 Rattus Norvegicus GSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYW
Syntaxin-1A B 67 Rattus Norvegicus MALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVK
Syntaxin-1A F 67 Rattus Norvegicus MALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVK
Syntaxin-1A J 67 Rattus Norvegicus MALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVK
Syntaxin-1A N 67 Rattus Norvegicus MALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVK
Syntaxin-1A R 67 Rattus Norvegicus MALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVK
Syntaxin-1A V 67 Rattus Norvegicus MALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVK
Synaptosomal-associated protein 25 C 77 Rattus Norvegicus MRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEEGMNHINQDMKEAEKNLKDLGK
Synaptosomal-associated protein 25 G 77 Rattus Norvegicus MRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEEGMNHINQDMKEAEKNLKDLGK
Synaptosomal-associated protein 25 K 77 Rattus Norvegicus MRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEEGMNHINQDMKEAEKNLKDLGK
Synaptosomal-associated protein 25 O 77 Rattus Norvegicus MRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEEGMNHINQDMKEAEKNLKDLGK
Synaptosomal-associated protein 25 S 77 Rattus Norvegicus MRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEEGMNHINQDMKEAEKNLKDLGK
Synaptosomal-associated protein 25 W 77 Rattus Norvegicus MRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEEGMNHINQDMKEAEKNLKDLGK
Synaptosomal-associated protein 25 D 65 Rattus Norvegicus MARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLG
Synaptosomal-associated protein 25 H 65 Rattus Norvegicus MARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLG
Synaptosomal-associated protein 25 L 65 Rattus Norvegicus MARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLG
Synaptosomal-associated protein 25 P 65 Rattus Norvegicus MARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLG
Synaptosomal-associated protein 25 T 65 Rattus Norvegicus MARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLG
Synaptosomal-associated protein 25 X 65 Rattus Norvegicus MARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2018-10-19
Deposition Author(s): Coleman, J. , Grushin, K. , Krishnakumar, S. , Rothman, J. , Sindelar, C. , Wang, J.