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FASTA Sequence PDB Format mmCIF Format
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6MID

Cryo-em structure of the zikv virion in complex with fab fragments of the potently neutralizing human monoclonal antibody zikv-195

PDB DOI: 10.2210/pdb6mid/pdb

Classification: VIRUS/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Zika Virus (Isolate Zikv/Human/French Polynesia/10087Pf/2013)

Deposited: 2018-09-19
Deposition Author(s): Long, F. , Rossmann, M.G.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.0 Å

6mid
Literature

Cryo-em structure of the zikv virion in complex with fab fragments of the potently neutralizing human monoclonal antibody zikv-195

Long, F. , Rossmann, M.G.

Primary Citation of Related Structures: 6MID


Proteins
Molecule Chains Sequence Length Organism Sequence
E protein A 504 Homo Sapiens , Zika Virus (Isolate Zikv/Human/French Polynesia/10087Pf/2013) IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIELVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFGAAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSA
E protein C 504 Homo Sapiens , Zika Virus (Isolate Zikv/Human/French Polynesia/10087Pf/2013) IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIELVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFGAAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSA
E protein E 504 Homo Sapiens , Zika Virus (Isolate Zikv/Human/French Polynesia/10087Pf/2013) IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIELVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFGAAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSA
M protein B 75 Homo Sapiens , Zika Virus (Isolate Zikv/Human/French Polynesia/10087Pf/2013) AVTLPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKVIYLVMILLIAPAYS
M protein D 75 Homo Sapiens , Zika Virus (Isolate Zikv/Human/French Polynesia/10087Pf/2013) AVTLPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKVIYLVMILLIAPAYS
M protein F 75 Homo Sapiens , Zika Virus (Isolate Zikv/Human/French Polynesia/10087Pf/2013) AVTLPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKVIYLVMILLIAPAYS
monoclonal antibody ZIKV-195 heavy chain H 128 Homo Sapiens , Zika Virus (Isolate Zikv/Human/French Polynesia/10087Pf/2013) QVQLVESGGGVVHPGRSLRLSCAASGFTFSSSAMHWVRQAPGKGLEWVAVISYDGSNKYYGDSVKGRFTISRDNSKNTLYLQMHSLRAEDTAVYYCAKDRDAYNTVGYFAYYYGMDVWGQGTLVTVSS
monoclonal antibody ZIKV-195 light chain L 110 Homo Sapiens , Zika Virus (Isolate Zikv/Human/French Polynesia/10087Pf/2013) QSVLTQPPSVSEAPRQRVTISCSGSSSNIGNNAVNWYQQLPGKAPKLLIYYDDLLPSGVSDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLTRYVFGTGTKVTVL
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2018-09-19
Deposition Author(s): Long, F. , Rossmann, M.G.