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6MG7

Crystal structure of the rv144 c1-c2 specific antibody ch54 fab in complex with hiv-1 clade a/e gp120 and m48u1

PDB DOI: 10.2210/pdb6mg7/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct

Deposited: 2018-09-13
Deposition Author(s): Pazgier, M. , Tolbert, W.D. , Van, V.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.91 Å

6mg7
Literature

Crystal structure of the rv144 c1-c2 specific antibody ch54 fab in complex with hiv-1 clade a/e gp120 and m48u1

Pazgier, M. , Tolbert, W.D. , Van, V.

Primary Citation of Related Structures: 6MG7


Proteins
Molecule Chains Sequence Length Organism Sequence
clade A/E 93TH057 HIV-1 gp120 core G 385 Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct SDNLWVTVYYGVPVWKDADTTLFCASDAKAHETEVHNVWATHACVPTDPNPQEIHLENVTENFNMWKNNMVEQMQEDVISLWDQSLQPCVKLTGGSVIKQACPKISFDPIPIHYCTPAGYVILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTNNAKTIIVHLNKSVEINCTRPSNGGSGSGGDIRKAYCEINGTKWNKVLKQVTEKLKEHFNNKTIIFQPPSGGDLEITMHSFNCRGEFFYCNTTQLFNNTCIGNETMKGCNGTITLPCKIKQIINMWQGTGQAMYAPPIDGKINCVSNITGILLTRDGGANNTSNETFRPGGGNIKDNWRSELYKYKVVQIEPLGIAPTKAKRRVVQREKR
M48U1 CD4 mimetic peptide N 28 Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct XNLHFCQLRCKSLGLLGRCAPTXCACVX
CH54 Fab heavy chain H 220 Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct QVQLVQSGPEVKKPGTSMKISCKASGFTFTRSTMQWVRQARGQRLEWIGWIVVGSGNTNYAQKFQERVTITRDMSTSTAYMELSSLRSEDTAVYYCAAAPVGPTSSDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
CH54 Fab light chain L 210 Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct DIQMTQSPSSLSASVGDRVTITCRASQSIINYLNWYQQKPGRAPKLLIYAASSLLSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPYTFGQGTKLEIKGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2018-09-13
Deposition Author(s): Pazgier, M. , Tolbert, W.D. , Van, V.