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6M6S

Crystal structure of caenorhabditis elegans dicer-related helicase 3 (drh-3) c-terminal domain with 5'-ppp 12-mer dsrna

PDB DOI: 10.2210/pdb6m6s/pdb

Classification: RNA BINDING PROTEIN/RNA
Organism(s): Human Herpesvirus 6B (Strain Hst) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2020-03-16
Deposition Author(s): Fedorova, O. , Griffin, P. , Li, K. , Luo, D. , Plyle, A. , Wirawan, M. , Xiong, Z. , Zheng, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.6 Å

Literature

Crystal structure of caenorhabditis elegans dicer-related helicase 3 (drh-3) c-terminal domain with 5'-ppp 12-mer dsrna

Fedorova, O. , Griffin, P. , Li, K. , Luo, D. , Plyle, A. , Wirawan, M. , Xiong, Z. , Zheng, J.

Primary Citation of Related Structures: 6M6S


Proteins
Molecule Chains Sequence Length Organism Sequence
Dicer Related Helicase A 170 Human Herpesvirus 6B (Strain Hst) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MRLRHENKIYKLMCSNCSKEFCKSIYIKKVFSNYMVFDPSVWRFLHVESKRKVSKYLSEDNQPLSDIKCFHCKLDVGRAYKIRGTYLPQLSVKALTFVQESDYSSMTKAKWSDVEQDLFYISEAIEDDFRIMLNALSDTEENIEKKIVLDLDSRQHNKQLEMKRFHIQQE
Dicer Related Helicase B 170 Human Herpesvirus 6B (Strain Hst) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MRLRHENKIYKLMCSNCSKEFCKSIYIKKVFSNYMVFDPSVWRFLHVESKRKVSKYLSEDNQPLSDIKCFHCKLDVGRAYKIRGTYLPQLSVKALTFVQESDYSSMTKAKWSDVEQDLFYISEAIEDDFRIMLNALSDTEENIEKKIVLDLDSRQHNKQLEMKRFHIQQE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(*(GTP)P*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3') c 12 NA GGCGCGCGCGCC
RNA (5'-R(*(GTP)P*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3') d 12 NA GGCGCGCGCGCC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2020-03-16
Deposition Author(s): Fedorova, O. , Griffin, P. , Li, K. , Luo, D. , Plyle, A. , Wirawan, M. , Xiong, Z. , Zheng, J.